RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 LSM14BQ9BX40 385 aaKnown RBP22.95■■□□□ 1.26
SSNA1-202ENST00000459860 PLA2G2FQ9BZM2 168 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 UBXN6Q9BZV1 441 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 BRD9Q9H8M2 597 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 TDP1Q9NUW8 608 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 WNT16Q9UBV4 365 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 DNAJC12Q9UKB3 198 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 CNTN6Q9UQ52 1028 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 RNF225M0QZC1 329 aaPredicted RBP22.94■■□□□ 1.26
SSNA1-202ENST00000459860 MED7O43513 233 aa22.94■■□□□ 1.26
SSNA1-202ENST00000459860 CAVIN2O95810 425 aa22.94■■□□□ 1.26
SSNA1-202ENST00000459860 SETSIPP0DME0 302 aa22.94■■□□□ 1.26
SSNA1-202ENST00000459860 ZNF18P17022 549 aa22.94■■□□□ 1.26
SSNA1-202ENST00000459860 GPC5P78333 572 aa22.94■■□□□ 1.26
SSNA1-202ENST00000459860 APBA1Q02410 837 aa22.94■■□□□ 1.26
SSNA1-202ENST00000459860 LCLAT1Q6UWP7 414 aa22.94■■□□□ 1.26
SSNA1-202ENST00000459860 TTC30AQ86WT1 665 aa22.94■■□□□ 1.26
SSNA1-202ENST00000459860 GPIHBP1Q8IV16 184 aa22.94■■□□□ 1.26
SSNA1-202ENST00000459860 IRF7Q92985 503 aa22.94■■□□□ 1.26
SSNA1-202ENST00000459860 SMG9Q9H0W8 520 aaKnown RBP22.94■■□□□ 1.26
SSNA1-202ENST00000459860 MFSD1Q9H3U5 465 aa22.94■■□□□ 1.26
SSNA1-202ENST00000459860 SIX2Q9NPC8 291 aa22.94■■□□□ 1.26
SSNA1-202ENST00000459860 TLR8Q9NR97 1041 aaKnown RBP22.94■■□□□ 1.26
SSNA1-202ENST00000459860 THG1LQ9NWX6 298 aaKnown RBP22.94■■□□□ 1.26
SSNA1-202ENST00000459860 IL37Q9NZH6 218 aa22.94■■□□□ 1.26
SSNA1-202ENST00000459860 FAM92AA1XBS5 289 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 C2orf78A6NCI8 922 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 HHLA1C9JL84 531 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 M0QYV0 167 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 ZNF263O14978 683 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 XPO1O14980 1071 aaKnown RBP22.93■■□□□ 1.26
SSNA1-202ENST00000459860 HDCP19113 662 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 AOC1P19801 751 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 BRD2P25440 801 aaKnown RBP22.93■■□□□ 1.26
SSNA1-202ENST00000459860 GDI1P31150 447 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 ZNF268Q14587 947 aaPredicted RBP22.93■■□□□ 1.26
SSNA1-202ENST00000459860 CNGA2Q16280 664 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 GPRIN1Q7Z2K8 1008 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 DHX40Q8IX18 779 aaKnown RBP22.93■■□□□ 1.26
SSNA1-202ENST00000459860 ARL14EPQ8N8R7 260 aaPredicted RBP22.93■■□□□ 1.26
SSNA1-202ENST00000459860 BPIFB1Q8TDL5 484 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 SHC3Q92529 594 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 DNASE1L2Q92874 299 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 PCMTD1Q96MG8 357 aaPredicted RBP22.93■■□□□ 1.26
SSNA1-202ENST00000459860 GMIPQ9P107 970 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 CA14Q9ULX7 337 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.93■■□□□ 1.26
SSNA1-202ENST00000459860 SCML2Q9UQR0 700 aa22.93■■□□□ 1.26
SSNA1-202ENST00000459860 TICRRQ7Z2Z1 1910 aa22.92■■□□□ 1.26
SSNA1-202ENST00000459860 LGALS16A8MUM7 142 aa22.92■■□□□ 1.26
SSNA1-202ENST00000459860 GNA15P30679 374 aa22.92■■□□□ 1.26
SSNA1-202ENST00000459860 PDE4CQ08493 712 aa22.92■■□□□ 1.26
SSNA1-202ENST00000459860 KCNMA1Q12791 1236 aa22.92■■□□□ 1.26
SSNA1-202ENST00000459860 RAPGEF1Q13905 1077 aa22.92■■□□□ 1.26
SSNA1-202ENST00000459860 ARHGAP29Q52LW3 1261 aa22.92■■□□□ 1.26
SSNA1-202ENST00000459860 PIGZQ86VD9 579 aa22.92■■□□□ 1.26
SSNA1-202ENST00000459860 FLCNQ8NFG4 579 aa22.92■■□□□ 1.26
SSNA1-202ENST00000459860 TFAP2BQ92481 460 aa22.92■■□□□ 1.26
SSNA1-202ENST00000459860 USP13Q92995 863 aaPredicted RBP22.92■■□□□ 1.26
SSNA1-202ENST00000459860 NACA2Q9H009 215 aa22.92■■□□□ 1.26
SSNA1-202ENST00000459860 LRRC4Q9HBW1 653 aa22.92■■□□□ 1.26
SSNA1-202ENST00000459860 PLCB1Q9NQ66 1216 aa22.92■■□□□ 1.26
SSNA1-202ENST00000459860 CHORDC1Q9UHD1 332 aaPredicted RBP22.92■■□□□ 1.26
SSNA1-202ENST00000459860 KIF26AQ9ULI4 1882 aaPredicted RBP22.92■■□□□ 1.26
SSNA1-202ENST00000459860 PRR23AA6NEV1 266 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 THAP12O43422 761 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 TUBP50607 506 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 KIF11P52732 1056 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 PLCB2Q00722 1185 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 UBXN1Q04323 297 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 FCHO2Q0JRZ9 810 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 NFKBIBQ15653 356 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 HECTD3Q5T447 861 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 KLHDC7AQ5VTJ3 777 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 CC2D1AQ6P1N0 951 aaPredicted RBP22.91■■□□□ 1.26
SSNA1-202ENST00000459860 SIX5Q8N196 739 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 TTC16Q8NEE8 873 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 UBA3Q8TBC4 463 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 RSPRY1Q96DX4 576 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 CYP2S1Q96SQ9 504 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 ARHGEF3Q9NR81 526 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 DAAM1Q9Y4D1 1078 aa22.91■■□□□ 1.26
SSNA1-202ENST00000459860 CHADO15335 359 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 CYP26A1O43174 497 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 OAS1P00973 400 aaKnown RBP22.9■■□□□ 1.26
SSNA1-202ENST00000459860 PLA2G4AP47712 749 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 PSEN1P49768 467 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 PTK2Q05397 1052 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 FILIP1LQ4L180 1135 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 SNX30Q5VWJ9 437 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 CCDC186Q7Z3E2 898 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 CCDC105Q8IYK2 499 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 SIX6OS1Q8N1H7 587 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 CSGALNACT1Q8TDX6 532 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 SHDQ96IW2 340 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 SLC22A12Q96S37 553 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 HSD3B7Q9H2F3 369 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 ARHGAP26Q9UNA1 814 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 CCL26Q9Y258 94 aa22.9■■□□□ 1.26
SSNA1-202ENST00000459860 FHOD1Q9Y613 1164 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms