RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 IL18RAPO95256 599 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 TRIM16O95361 564 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 NFATC1O95644 943 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 USP17L7P0C7H9 530 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 HAPLN1P10915 354 aaPredicted RBP6.09□□□□□ -1.43
VPS8-214ENST00000458721 HMGA1P17096 107 aaKnown RBP6.09□□□□□ -1.43
VPS8-214ENST00000458721 GJA4P35212 333 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 NEK4P51957 841 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 DGKEP52429 567 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 SLC12A3P55017 1021 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 PSMA6P60900 246 aaKnown RBP6.09□□□□□ -1.43
VPS8-214ENST00000458721 RPL10AP62906 217 aaKnown RBP6.09□□□□□ -1.43
VPS8-214ENST00000458721 CYP4F8P98187 520 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 ATP2C1P98194 919 aaPredicted RBP6.09□□□□□ -1.43
VPS8-214ENST00000458721 CREB5Q02930 508 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 BYSLQ13895 437 aaKnown RBP6.09□□□□□ -1.43
VPS8-214ENST00000458721 HNRNPDQ14103 355 aaKnown RBP6.09□□□□□ -1.43
VPS8-214ENST00000458721 DMC1Q14565 340 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 ZNF77Q15935 545 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 PEAR1Q5VY43 1037 aaPredicted RBP6.09□□□□□ -1.43
VPS8-214ENST00000458721 SLFN12LQ6IEE8 588 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 PKN3Q6P5Z2 889 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 TMEM150AQ86TG1 271 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 TTC9BQ8N6N2 239 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 FAM184AQ8NB25 1140 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 TSTD1Q8NFU3 115 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 RPLP0P6Q8NHW5 317 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 GATA6Q92908 595 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 GLMNQ92990 594 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 USP13Q92995 863 aaPredicted RBP6.09□□□□□ -1.43
VPS8-214ENST00000458721 CD101Q93033 1021 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 CHFRQ96EP1 664 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 ZBTB45Q96K62 511 aaPredicted RBP6.09□□□□□ -1.43
VPS8-214ENST00000458721 BTBD6Q96KE9 485 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 SPACA7Q96KW9 195 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 ZSCAN31Q96LW9 406 aaPredicted RBP6.09□□□□□ -1.43
VPS8-214ENST00000458721 HHIPQ96QV1 700 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 LPIN3Q9BQK8 851 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 MMTAG2Q9BU76 263 aaKnown RBP6.09□□□□□ -1.43
VPS8-214ENST00000458721 MSTO1Q9BUK6 570 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 SLC46A2Q9BY10 475 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 ST6GALNAC4Q9H4F1 302 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 EBF3Q9H4W6 596 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 SLC32A1Q9H598 525 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 ECT2Q9H8V3 914 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 PARVGQ9HBI0 331 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 GKN1Q9NS71 199 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 EHD2Q9NZN4 543 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 MARK1Q9P0L2 795 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 HCN2Q9UL51 889 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 ZMIZ1Q9ULJ6 1067 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 LIMCH1Q9UPQ0 1083 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 PCDHB5Q9Y5E4 795 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 TIMM13Q9Y5L4 95 aaPredicted RBP6.09□□□□□ -1.43
VPS8-214ENST00000458721 AKAP13Q12802 2813 aa6.09□□□□□ -1.43
VPS8-214ENST00000458721 TRAV19A0A0A6YYK7 116 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 OTOL1A6NHN0 477 aaPredicted RBP6.08□□□□□ -1.44
VPS8-214ENST00000458721 KPNA7A9QM74 516 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 K7ENM7 598 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 TNFRSF10BO14763 440 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 GNB5O14775 395 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 BMP15O95972 392 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 EGFP01133 1207 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 CKMP06732 381 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 NFICP08651 508 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 HOXB4P17483 251 aaPredicted RBP6.08□□□□□ -1.44
VPS8-214ENST00000458721 PCSK1P29120 753 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 GBP1P32455 592 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 RDXP35241 583 aaKnown RBP6.08□□□□□ -1.44
VPS8-214ENST00000458721 TNFSF9P41273 254 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 PPP3CCP48454 512 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 IFNAR2P48551 515 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 MRPS21P82921 87 aaKnown RBP6.08□□□□□ -1.44
VPS8-214ENST00000458721 GTF2BQ00403 316 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 ST3GAL1Q11201 340 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 KCNB1Q14721 858 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 MAPRE1Q15691 268 aaKnown RBP6.08□□□□□ -1.44
VPS8-214ENST00000458721 PREPLQ4J6C6 727 aaPredicted RBP6.08□□□□□ -1.44
VPS8-214ENST00000458721 TMEM119Q4V9L6 283 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 SH3PXD2AQ5TCZ1 1133 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 ZNF468Q5VIY5 522 aaPredicted RBP6.08□□□□□ -1.44
VPS8-214ENST00000458721 JADE1Q6IE81 842 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 LRRC69Q6ZNQ3 347 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 KCNK18Q7Z418 384 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 LRRC52Q8N7C0 313 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 MAB21L3Q8N8X9 362 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 DUSP9Q99956 384 aaKnown RBP6.08□□□□□ -1.44
VPS8-214ENST00000458721 ACBD6Q9BR61 282 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 REEP2Q9BRK0 252 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 NUSAP1Q9BXS6 441 aaKnown RBP6.08□□□□□ -1.44
VPS8-214ENST00000458721 HAPLN2Q9GZV7 340 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 TSPAN10Q9H1Z9 355 aaPredicted RBP6.08□□□□□ -1.44
VPS8-214ENST00000458721 DUS2Q9NX74 493 aaKnown RBP6.08□□□□□ -1.44
VPS8-214ENST00000458721 ABI2Q9NYB9 513 aaPredicted RBP6.08□□□□□ -1.44
VPS8-214ENST00000458721 SEL1LQ9UBV2 794 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 MMP17Q9ULZ9 603 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 ARHGAP26Q9UNA1 814 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 CCL26Q9Y258 94 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 MSRB2Q9Y3D2 182 aa6.08□□□□□ -1.44
VPS8-214ENST00000458721 PCDHB6Q9Y5E3 794 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms