RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 MBD3O95983 291 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 GLULP15104 373 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 RUNX3Q13761 415 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 PON2Q15165 354 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 GJB7Q6PEY0 223 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 RBBP8NLQ8NC74 664 aaPredicted RBP19.72■□□□□ 0.75
USP39-209ENST00000458268 LMO3Q8TAP4 145 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 UBA3Q8TBC4 463 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 C8orf33Q9H7E9 229 aaPredicted RBP19.72■□□□□ 0.75
USP39-209ENST00000458268 UBE2TQ9NPD8 197 aaPredicted RBP19.72■□□□□ 0.75
USP39-209ENST00000458268 HPS4Q9NQG7 708 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 TLR8Q9NR97 1041 aaKnown RBP19.72■□□□□ 0.75
USP39-209ENST00000458268 NUDT5Q9UKK9 219 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 ARHGAP26Q9UNA1 814 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 HHLA1C9JL84 531 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 COCHO43405 550 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 OAS1P00973 400 aaKnown RBP19.71■□□□□ 0.75
USP39-209ENST00000458268 BRD2P25440 801 aaKnown RBP19.71■□□□□ 0.75
USP39-209ENST00000458268 CTHP32929 405 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 PLA2G5P39877 138 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 USP8P40818 1118 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 PGFP49763 221 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 APBA1Q02410 837 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 NHLH1Q02575 133 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 ANGPT1Q15389 498 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 ARHGAP44Q17R89 818 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 TXNDC11Q6PKC3 985 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 GBP6Q6ZN66 633 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 IRF2BP1Q8IU81 584 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 OVCA2Q8WZ82 227 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 THAP9Q9H5L6 903 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 TRPV5Q9NQA5 729 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 RBM12Q9NTZ6 932 aaKnown RBP19.71■□□□□ 0.75
USP39-209ENST00000458268 COMMD8Q9NX08 183 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 NAGPAQ9UK23 515 aa19.71■□□□□ 0.75
USP39-209ENST00000458268 F5P12259 2224 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 A0A1W2PQH9 124 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 PMM2O15305 246 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 VDRP11473 427 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 SLC9A1P19634 815 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 ERCC5P28715 1186 aaPredicted RBP19.7■□□□□ 0.74
USP39-209ENST00000458268 PDGFRLQ15198 375 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 ARHGAP17Q68EM7 881 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 PIGZQ86VD9 579 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 TTC30AQ86WT1 665 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 CPA6Q8N4T0 437 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 UBR7Q8N806 425 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 OSCP1Q8WVF1 389 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 NELL2Q99435 816 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 FAM83CQ9BQN1 747 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 LINC00597Q9H2U6 94 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 LMAN1LQ9HAT1 526 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 SAMSN1Q9NSI8 373 aaKnown RBP19.7■□□□□ 0.74
USP39-209ENST00000458268 SH3BP1Q9Y3L3 701 aa19.7■□□□□ 0.74
USP39-209ENST00000458268 SHISA7A6NL88 538 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 KCNJ18B7U540 433 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 M0QYV0 167 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 TULP2O00295 520 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 PIK3R2O00459 728 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 MDM4O15151 490 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 TLR5O60602 858 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 TBX18O95935 607 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 BCAT1P54687 386 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 ZXDBP98169 803 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 PDE4CQ08493 712 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 KCNJ12Q14500 433 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 MAN2A1Q16706 1144 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 EXOC3L4Q17RC7 722 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 CCDC183Q5T5S1 534 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 RALGPS2Q86X27 583 aaPredicted RBP19.69■□□□□ 0.74
USP39-209ENST00000458268 ANKRD52Q8NB46 1076 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 KREMEN1Q96MU8 473 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 FAM124BQ9H5Z6 455 aaPredicted RBP19.69■□□□□ 0.74
USP39-209ENST00000458268 NMUR1Q9HB89 426 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 LRRC4Q9HBW1 653 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 DLGAP2Q9P1A6 1054 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 SCML2Q9UQR0 700 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 NFE2L3Q9Y4A8 694 aa19.69■□□□□ 0.74
USP39-209ENST00000458268 ATG2BQ96BY7 2078 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 OTOL1A6NHN0 477 aaPredicted RBP19.68■□□□□ 0.74
USP39-209ENST00000458268 RNF225M0QZC1 329 aaPredicted RBP19.68■□□□□ 0.74
USP39-209ENST00000458268 LAMTOR5O43504 91 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 RARGP13631 454 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 PFKLP17858 780 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 RGS7P49802 495 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 TKTL1P51854 596 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 KIF11P52732 1056 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 NUBP1P53384 320 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 SLC7A9P82251 487 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 GCNT1Q02742 428 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 BST2Q10589 180 aaKnown RBP19.68■□□□□ 0.74
USP39-209ENST00000458268 C10orf120Q5SQS8 335 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 TRIM65Q6PJ69 517 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 C11orf57Q6ZUT1 292 aaPredicted RBP19.68■□□□□ 0.74
USP39-209ENST00000458268 TFAP2BQ92481 460 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 ATP2A3Q93084 1043 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 PHOX2BQ99453 314 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 TUBGCP2Q9BSJ2 902 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 TAB2Q9NYJ8 693 aa19.68■□□□□ 0.74
USP39-209ENST00000458268 IL37Q9NZH6 218 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms