RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 SCARA5Q6ZMJ2 495 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 CYP2U1Q7Z449 544 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 TADA2BQ86TJ2 420 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 ACOT1Q86TX2 421 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 TXNDC5Q8NBS9 432 aaKnown RBP9.35□□□□□ -0.91
PKP4-207ENST00000457109 SPRYD3Q8NCJ5 442 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 RIN3Q8TB24 985 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 KCNV2Q8TDN2 545 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 PARD3BQ8TEW8 1205 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 WHAMMQ8TF30 809 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 ZNF516Q92618 1163 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 XPO6Q96QU8 1125 aaKnown RBP9.35□□□□□ -0.91
PKP4-207ENST00000457109 KCNK16Q96T55 309 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 EDEM2Q9BV94 578 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 NUSAP1Q9BXS6 441 aaKnown RBP9.35□□□□□ -0.91
PKP4-207ENST00000457109 TPSD1Q9BZJ3 242 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 DPEP3Q9H4B8 488 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.35□□□□□ -0.912e-6■■■■■ 114.1
PKP4-207ENST00000457109 POLR3BQ9NW08 1133 aaPredicted RBP9.35□□□□□ -0.91
PKP4-207ENST00000457109 SERTAD1Q9UHV2 236 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 ANGPTL2Q9UKU9 493 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 ZNF292O60281 2723 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 GPR179Q6PRD1 2367 aa9.35□□□□□ -0.91
PKP4-207ENST00000457109 OTOGLQ3ZCN5 2332 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 BCLAF3A2AJT9 711 aaKnown RBP9.34□□□□□ -0.91
PKP4-207ENST00000457109 LRRIQ3A6PVS8 624 aaPredicted RBP9.34□□□□□ -0.91
PKP4-207ENST00000457109 IKBKBO14920 756 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 COCHO43405 550 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 OAS1P00973 400 aaKnown RBP9.34□□□□□ -0.91
PKP4-207ENST00000457109 CYP17A1P05093 508 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 FAM200BP0CF97 657 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 IRF1P10914 325 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 HOXC13P31276 330 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 RDXP35241 583 aaKnown RBP9.34□□□□□ -0.91
PKP4-207ENST00000457109 ATP5C1P36542 298 aaKnown RBP9.34□□□□□ -0.91
PKP4-207ENST00000457109 OPRD1P41143 372 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 PIK3CAP42336 1068 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 SLC6A11P48066 632 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 CASP4P49662 377 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 TUBP50607 506 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 SLC5A3P53794 718 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 ATXN3P54252 364 aaPredicted RBP9.34□□□□□ -0.91
PKP4-207ENST00000457109 PLA2G2CQ5R387 149 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 LY6G5CQ5SRR4 150 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 NAIF1Q69YI7 327 aaPredicted RBP9.34□□□□□ -0.91
PKP4-207ENST00000457109 RHBDF2Q6PJF5 856 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 FAM35AQ86V20 835 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 UNC93AQ86WB7 457 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 SLC9A9Q8IVB4 645 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 ALLCQ8N6M5 410 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 NAT16Q8N8M0 369 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 SCAMP5Q8TAC9 235 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 TMC2Q8TDI7 906 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 PIGKQ92643 395 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 PAGE5Q96GU1 130 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 CNOT6LQ96LI5 555 aaKnown RBP9.34□□□□□ -0.91
PKP4-207ENST00000457109 XYLT2Q9H1B5 865 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 SMYD3Q9H7B4 428 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 WDR35Q9P2L0 1181 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 RCOR1Q9UKL0 485 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 ATP6V1DQ9Y5K8 247 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 WDR87Q6ZQQ6 2873 aa9.34□□□□□ -0.91
PKP4-207ENST00000457109 TICRRQ7Z2Z1 1910 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 FRYLO94915 3013 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 C4orf47A7E2U8 309 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 SCAMP3O14828 347 aaKnown RBP9.33□□□□□ -0.92
PKP4-207ENST00000457109 OLFM2O95897 454 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 C4BPAP04003 597 aaKnown RBP9.33□□□□□ -0.92
PKP4-207ENST00000457109 NR3C1P04150 777 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 RALAP11233 206 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 CMA1P23946 247 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 ADORA2BP29275 332 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 VAMP7P51809 220 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 NDST1P52848 882 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 CACNA2D1P54289 1103 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 MAP3K7CLP57077 242 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 SLC8A3P57103 927 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 KRT85P78386 507 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 DNM1Q05193 864 aaKnown RBP9.33□□□□□ -0.92
PKP4-207ENST00000457109 KDSRQ06136 332 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 LMAN2Q12907 356 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 STK4Q13043 487 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 E2F5Q15329 346 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 ST3GAL2Q16842 350 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 KMT5BQ4FZB7 885 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 N4BP2L1Q5TBK1 243 aaPredicted RBP9.33□□□□□ -0.92
PKP4-207ENST00000457109 SNX30Q5VWJ9 437 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 SLC36A4Q6YBV0 504 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 GRAMD1CQ8IYS0 662 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 CRYBG2Q8N1P7 616 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 SLC2A14Q8TDB8 520 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 HMGB4Q8WW32 186 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 SPATA32Q96LK8 384 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 LSM14BQ9BX40 385 aaKnown RBP9.33□□□□□ -0.92
PKP4-207ENST00000457109 NT5C1AQ9BXI3 368 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 SMOC1Q9H4F8 434 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 TMEM9BQ9NQ34 198 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 SPHK2Q9NRA0 654 aa9.33□□□□□ -0.92
PKP4-207ENST00000457109 KRT82Q9NSB4 513 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms