RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 FAM110CQ1W6H9 321 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 RNASEH2BQ5TBB1 312 aaKnown RBP12.98□□□□□ -0.33
LINC00959-201ENST00000456581 HHATQ5VTY9 493 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 OLFML2BQ68BL8 750 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 PLEKHA7Q6IQ23 1121 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 SPOCD1Q6ZMY3 1216 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 LRRC6Q86X45 466 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 PHF13Q86YI8 300 aaPredicted RBP12.98□□□□□ -0.33
LINC00959-201ENST00000456581 EXOC8Q8IYI6 725 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 EMC1Q8N766 993 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 EXD1Q8NHP7 514 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 FBXO27Q8NI29 283 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 CXorf38Q8TB03 319 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 DTX3LQ8TDB6 740 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 ZNF483Q8TF39 744 aaPredicted RBP12.98□□□□□ -0.33
LINC00959-201ENST00000456581 ZNF75CPQ92670 426 aaPredicted RBP12.98□□□□□ -0.33
LINC00959-201ENST00000456581 CFAP57Q96MR6 1250 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 NUDCD1Q96RS6 583 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 PARK7Q99497 189 aaKnown RBP12.98□□□□□ -0.33
LINC00959-201ENST00000456581 ZNF395Q9H8N7 513 aaPredicted RBP12.98□□□□□ -0.33
LINC00959-201ENST00000456581 PPEF2O14830 753 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 CPA2P48052 419 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 BEX3Q00994 111 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 RAB6CQ53S08 254 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 GLRA4Q5JXX5 417 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 DCUN1D2Q6PH85 259 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 TCP10LQ8TDR4 215 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 TRIM11Q96F44 468 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 OSMRQ99650 979 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 OSBPL1AQ9BXW6 950 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 RAB6CQ9H0N0 254 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 ABHD16BQ9H3Z7 469 aa12.98□□□□□ -0.33
LINC00959-201ENST00000456581 TYROBPO43914 113 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 AVILO75366 819 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 CYP2B6P20813 491 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 IL1R2P27930 398 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 TNFAIP2Q03169 654 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 GRM1Q13255 1194 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 PDK4Q16654 411 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 ZNF667Q5HYK9 610 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 NLRP9Q7RTR0 991 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 APBB1IPQ7Z5R6 666 aaPredicted RBP12.97□□□□□ -0.33
LINC00959-201ENST00000456581 IGDCC3Q8IVU1 814 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 CCHCR1Q8TD31 782 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 NRG4Q8WWG1 115 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 EIF2AQ9BY44 585 aaKnown RBP12.97□□□□□ -0.33
LINC00959-201ENST00000456581 LRMDAQ9H2I8 198 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 STARD13Q9Y3M8 1113 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 USH1CQ9Y6N9 552 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 CFAP69A5D8W1 941 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 MAGEB2O15479 319 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 FAM155BO75949 473 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 CTCFP49711 727 aaPredicted RBP12.97□□□□□ -0.33
LINC00959-201ENST00000456581 AP3M2P53677 418 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 YARSP54577 528 aaKnown RBP12.97□□□□□ -0.33
LINC00959-201ENST00000456581 SLC8A3P57103 927 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 DGKDQ16760 1214 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 PTPN20Q4JDL3 420 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
LINC00959-201ENST00000456581 GTF3C2Q8WUA4 911 aaPredicted RBP12.97□□□□□ -0.33
LINC00959-201ENST00000456581 MAIP1Q8WWC4 291 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 EMID1Q96A84 441 aaPredicted RBP12.97□□□□□ -0.33
LINC00959-201ENST00000456581 PLCD4Q9BRC7 762 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 APOL6Q9BWW8 343 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 ELOVL4Q9GZR5 314 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 TXLNGQ9NUQ3 528 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 ARL8BQ9NVJ2 186 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 PCSK1NQ9UHG2 260 aa12.97□□□□□ -0.33
LINC00959-201ENST00000456581 TMEM191CA6NGB0 347 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 TMEM63AO94886 807 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 PTDSS1P48651 473 aaKnown RBP12.96□□□□□ -0.33
LINC00959-201ENST00000456581 GRIK3Q13003 919 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 BLMHQ13867 455 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 BBS9Q3SYG4 887 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 MDH1BQ5I0G3 518 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 TRIM72Q6ZMU5 477 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 C3orf62Q6ZUJ4 267 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 JOSD2Q8TAC2 188 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 ZMAT2Q96NC0 199 aaKnown RBP12.96□□□□□ -0.33
LINC00959-201ENST00000456581 TRIM56Q9BRZ2 755 aaKnown RBP12.96□□□□□ -0.33
LINC00959-201ENST00000456581 RNPEPL1Q9HAU8 725 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 MRPL47Q9HD33 250 aaKnown RBP12.96□□□□□ -0.33
LINC00959-201ENST00000456581 ARMCX1Q9P291 453 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 ZFP69BQ9UJL9 534 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 SLC45A1Q9Y2W3 748 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 BPTFQ12830 3046 aa12.96□□□□□ -0.33
LINC00959-201ENST00000456581 hCG_1818297A0A087WSY0 165 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 HCRTO43612 131 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 NPTXRO95502 500 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 HOXA11P31270 313 aaPredicted RBP12.96□□□□□ -0.34
LINC00959-201ENST00000456581 OTUD4Q01804 1114 aaKnown RBP12.96□□□□□ -0.34
LINC00959-201ENST00000456581 C1QBPQ07021 282 aaKnown RBP12.96□□□□□ -0.34
LINC00959-201ENST00000456581 NR1H3Q13133 447 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 OASLQ15646 514 aaKnown RBP12.96□□□□□ -0.34
LINC00959-201ENST00000456581 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.34
LINC00959-201ENST00000456581 ARFGAP1Q8N6T3 406 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 C12orf29Q8N999 325 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 SLC4A11Q8NBS3 891 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 FBXO36Q8NEA4 188 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms