RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 E2F4Q16254 413 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 UAP1L1Q3KQV9 507 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 HSF5Q4G112 596 aaPredicted RBP13.18□□□□□ -0.3
TRA2B-206ENST00000456380 LY6G5CQ5SRR4 150 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 LPCAT2Q7L5N7 544 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 PHTF2Q8N3S3 785 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 ZNF507Q8TCN5 953 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 WHAMMQ8TF30 809 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 ZNF516Q92618 1163 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 ZFRQ96KR1 1074 aaKnown RBP13.18□□□□□ -0.3
TRA2B-206ENST00000456380 SLITRK1Q96PX8 696 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 TMEM121BQ9BXQ6 578 aaPredicted RBP13.18□□□□□ -0.3
TRA2B-206ENST00000456380 TRIM9Q9C026 710 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 ELOVL4Q9GZR5 314 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 GZF1Q9H116 711 aaPredicted RBP13.18□□□□□ -0.3
TRA2B-206ENST00000456380 TNMDQ9H2S6 317 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 POLMQ9NP87 494 aaPredicted RBP13.18□□□□□ -0.3
TRA2B-206ENST00000456380 AGPAT3Q9NRZ7 376 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 ZMIZ1Q9ULJ6 1067 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 CIZ1Q9ULV3 898 aaPredicted RBP13.18□□□□□ -0.3
TRA2B-206ENST00000456380 CELSR3Q9NYQ7 3312 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 MYOFQ9NZM1 2061 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 LOC400499M0QZD8 3231 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 A8MXQ7 604 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 TNFRSF10BO14763 440 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 CLIC2O15247 247 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 EIF3DO15371 548 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRA2B-206ENST00000456380 MAP3K13O43283 966 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 COCHO43405 550 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 ADH1CP00326 375 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 YWHAQP27348 245 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 TNFRSF4P43489 277 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 TNNC1P63316 161 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 KDSRQ06136 332 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 CYP24A1Q07973 514 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 PSMD6Q15008 389 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 MAP7D1Q3KQU3 841 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 TRIM61Q5EBN2 209 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 EOGTQ5NDL2 527 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 ARMCX6Q7L4S7 300 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 DDX42Q86XP3 938 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRA2B-206ENST00000456380 NUP93Q8N1F7 819 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 KDF1Q8NAX2 398 aaPredicted RBP13.18□□□□□ -0.3
TRA2B-206ENST00000456380 B3GALNT2Q8NCR0 500 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 DEFB124Q8NES8 71 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 CCDC127Q96BQ5 260 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 KCNK16Q96T55 309 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 CGRRF1Q99675 332 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 TBC1D14Q9P2M4 693 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 CHORDC1Q9UHD1 332 aaPredicted RBP13.18□□□□□ -0.3
TRA2B-206ENST00000456380 MTMR6Q9Y217 621 aa13.18□□□□□ -0.3
TRA2B-206ENST00000456380 PKD1L2Q7Z442 2459 aa13.17□□□□□ -0.3
TRA2B-206ENST00000456380 E2F8A0AVK6 867 aa13.17□□□□□ -0.3
TRA2B-206ENST00000456380 STAU1O95793 577 aaKnown RBP13.17□□□□□ -0.3
TRA2B-206ENST00000456380 CYP2J2P51589 502 aa13.17□□□□□ -0.3
TRA2B-206ENST00000456380 MYL6P60660 151 aa13.17□□□□□ -0.3
TRA2B-206ENST00000456380 SYT12Q8IV01 421 aa13.17□□□□□ -0.3
TRA2B-206ENST00000456380 ETFBKMTQ8IXQ9 262 aa13.17□□□□□ -0.3
TRA2B-206ENST00000456380 SCAMP5Q8TAC9 235 aa13.17□□□□□ -0.3
TRA2B-206ENST00000456380 HMGB4Q8WW32 186 aa13.17□□□□□ -0.3
TRA2B-206ENST00000456380 SPACA7Q96KW9 195 aa13.17□□□□□ -0.3
TRA2B-206ENST00000456380 NUSAP1Q9BXS6 441 aaKnown RBP13.17□□□□□ -0.3
TRA2B-206ENST00000456380 ADAM33Q9BZ11 813 aa13.17□□□□□ -0.3
TRA2B-206ENST00000456380 XYLT2Q9H1B5 865 aa13.17□□□□□ -0.3
TRA2B-206ENST00000456380 BCCIPQ9P287 314 aaKnown RBP eCLIP13.17□□□□□ -0.33e-7■■■■□ 23.8
TRA2B-206ENST00000456380 NXF1Q9UBU9 619 aaKnown RBP13.17□□□□□ -0.3
TRA2B-206ENST00000456380 PCNX2A6NKB5 2137 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 MYO18AQ92614 2054 aaKnown RBP13.16□□□□□ -0.3
TRA2B-206ENST00000456380 TCRBV21S2A2A0A5A6 115 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.16□□□□□ -0.3
TRA2B-206ENST00000456380 RTN3O95197 1032 aaPredicted RBP13.16□□□□□ -0.3
TRA2B-206ENST00000456380 ENGP17813 658 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 MAPK8P45983 427 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 NASPP49321 788 aaPredicted RBP13.16□□□□□ -0.3
TRA2B-206ENST00000456380 GAD2Q05329 585 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 LMAN2Q12907 356 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 SNX30Q5VWJ9 437 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 PAQR9Q6ZVX9 377 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 NELFCDQ8IXH7 590 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 NAT16Q8N8M0 369 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 XXYLT1Q8NBI6 393 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 LINC00301Q8NCQ3 95 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 PDZD8Q8NEN9 1154 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 SCFD1Q8WVM8 642 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 OVCA2Q8WZ82 227 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 FBXO32Q969P5 355 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 WBP2Q969T9 261 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 SCNM1Q9BWG6 230 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 LRRC27Q9C0I9 530 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 CCSER2Q9H7U1 834 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 IL37Q9NZH6 218 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 PILRBQ9UKJ0 227 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 HCN2Q9UL51 889 aa13.16□□□□□ -0.3
TRA2B-206ENST00000456380 TBC1D3BA6NDS4 549 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 TRIM24O15164 1050 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 HOXC11O43248 304 aaPredicted RBP13.15□□□□□ -0.3
TRA2B-206ENST00000456380 ITPKAP23677 461 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 CDH8P55286 799 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 ASIC1P78348 528 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 TRPC3Q13507 836 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms