RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ANKRD34AQ69YU3 496 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 INTS5Q6P9B9 1019 aaKnown RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 C1orf186Q6ZWK4 172 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 PCYOX1LQ8NBM8 494 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 ABHD8Q96I13 439 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 SNX27Q96L92 541 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CEP295NLQ96MC4 621 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 FBXL18Q96ME1 805 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 AGPAT1Q99943 283 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 NACAP1Q9BZK3 213 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 TNFRSF12AQ9NP84 129 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 ZNF212Q9UDV6 495 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 STK17AQ9UEE5 414 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 SH3GLB1Q9Y371 365 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 MTF2Q9Y483 593 aaPredicted RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 ALOX15BO15296 676 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 DGKIO75912 1065 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 TMCC1O94876 653 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 HAUS5O94927 633 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 FGFR1OPO95684 399 aaKnown RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 NCAM1P13591 858 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 KRT15P19012 456 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 UGT1A1P22309 533 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 BMPR1AP36894 532 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 ALDH3B2P48448 385 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 MRPS22P82650 360 aaKnown RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CDK16Q00536 496 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 UBE4AQ14139 1066 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 KIF22Q14807 665 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 DBN1Q16643 649 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 USP41Q3LFD5 358 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 DHDDSQ86SQ9 333 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CHERPQ8IWX8 916 aaKnown RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 FAM71AQ8IYT1 594 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 STKLD1Q8NE28 680 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 TBC1D15Q8TC07 691 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CTNNBL1Q8WYA6 563 aaPredicted RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 SLCO4A1Q96BD0 722 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 OXNAD1Q96HP4 312 aaPredicted RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 SCUBE2Q9NQ36 999 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 SIRPGQ9P1W8 387 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 PDP2Q9P2J9 529 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 APEX2Q9UBZ4 518 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 NUDT5Q9UKK9 219 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 GNEQ9Y223 722 aaKnown RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 FAM32AQ9Y421 112 aaKnown RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 WDR81Q562E7 1941 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 TCRBV9S1A1TA0A576 114 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 PODXLO00592 558 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 IFNB1P01574 187 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 POLR2MP0CAP2 368 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ESRRAP11474 423 aaPredicted RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 XBP1P17861 261 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 TCEA1P23193 301 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 STIP1P31948 543 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 TEX44Q53QW1 395 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 C10orf76Q5T2E6 689 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 TEDDM1Q5T9Z0 273 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 SPOPLQ6IQ16 392 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 LYPD8Q6UX82 237 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 RELL1Q8IUW5 271 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 CPSF7Q8N684 471 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 SLC26A7Q8TE54 656 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ZNF516Q92618 1163 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 PPP2R3CQ969Q6 453 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 PGBD4Q96DM1 585 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 DHRS1Q96LJ7 313 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 SORT1Q99523 831 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 SPZ1Q9BXG8 430 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 PCDHAC1Q9H158 963 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 XAB2Q9HCS7 855 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 QPCTLQ9NXS2 382 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 BTBD7Q9P203 1132 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 VAV3Q9UKW4 847 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 E2F8A0AVK6 867 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 GOLGA8IPA6NC78 632 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 GOLGA8JA6NMD2 632 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 CASQ2O14958 399 aaPredicted RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 LSM1O15116 133 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ONECUT3O60422 494 aaPredicted RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 CLPTM1O96005 669 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 CSH1P0DML2 217 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 CSH2P0DML3 217 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 AQP5P55064 265 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 NFIAQ12857 509 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 OLIG2Q13516 323 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 PTK6Q13882 451 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ANKRD20A4Q4UJ75 823 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 FAXCQ5TGI0 409 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ARHGEF18Q6ZSZ5 1173 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 C3orf62Q6ZUJ4 267 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ZNF720Q7Z2F6 126 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 VPS52Q8N1B4 723 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 CCDC33Q8N5R6 958 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 DTX3Q8N9I9 347 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 TMEM102Q8N9M5 508 aaPredicted RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 CFAP61Q8NHU2 1237 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 LENG8Q96PV6 779 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms