RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 SLC9C1Q4G0N8 1177 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 C9orf50Q5SZB4 431 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 ABRAQ8N0Z2 381 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 RSPRY1Q96DX4 576 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 NLRP4Q96MN2 994 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 POLR3GLQ9BT43 218 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 SELENONQ9NZV5 590 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 KLHL42Q9P2K6 505 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 TRHDEQ9UKU6 1024 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 PRKAB1Q9Y478 270 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 PLEKHM1Q9Y4G2 1056 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 MRFAP1Q9Y605 127 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 GABRDO14764 452 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 GRPP07492 148 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 APEHP13798 732 aaKnown RBP2.76□□□□□ -1.97
LINC02540-201ENST00000455554 TYRP14679 529 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 HDCP19113 662 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 CDC25AP30304 524 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 GKP32189 559 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 COPB1P53618 953 aaKnown RBP2.76□□□□□ -1.97
LINC02540-201ENST00000455554 ADKP55263 362 aaKnown RBP2.76□□□□□ -1.97
LINC02540-201ENST00000455554 SUMO2P61956 95 aaKnown RBP2.76□□□□□ -1.97
LINC02540-201ENST00000455554 LMAN2Q12907 356 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 MTMR1Q13613 665 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 ZNF750Q32MQ0 723 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 TMEM63BQ5T3F8 832 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 EMC10Q5UCC4 262 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 SYDE2Q5VT97 1194 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 CAPRIN2Q6IMN6 1127 aaKnown RBP2.76□□□□□ -1.97
LINC02540-201ENST00000455554 RANBP10Q6VN20 620 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 DCDC5Q6ZRR9 648 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 UBE2Q1Q7Z7E8 422 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 DNASE2BQ8WZ79 361 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 LMLNQ96KR4 655 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 FAM167AQ96KS9 214 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 ANP32EQ9BTT0 268 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 METTL14Q9HCE5 456 aaKnown RBP2.76□□□□□ -1.97
LINC02540-201ENST00000455554 TMEM8AQ9HCN3 771 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 SEMA4BQ9NPR2 832 aaPredicted RBP2.76□□□□□ -1.97
LINC02540-201ENST00000455554 LMBRD1Q9NUN5 540 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 MAFFQ9ULX9 164 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 PCDHA1Q9Y5I3 950 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 SNX14Q9Y5W7 946 aa2.76□□□□□ -1.97
LINC02540-201ENST00000455554 PSMD9O00233 223 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 FOXN3O00409 490 aaPredicted RBP2.75□□□□□ -1.97
LINC02540-201ENST00000455554 ZRANB2O95218 330 aaKnown RBP eCLIP2.75□□□□□ -1.97
LINC02540-201ENST00000455554 PARNO95453 639 aaKnown RBP2.75□□□□□ -1.97
LINC02540-201ENST00000455554 IGKV3-20P01619 116 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 KRT85P78386 507 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 HSF1Q00613 529 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 AMPD3Q01432 767 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 MLC1Q15049 377 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 INPP5JQ15735 1006 aaPredicted RBP2.75□□□□□ -1.97
LINC02540-201ENST00000455554 MANEAQ5SRI9 462 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 EFCAB2Q5VUJ9 269 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 VSTM1Q6UX27 236 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 PTCHD4Q6ZW05 846 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 NECAB2Q7Z6G3 386 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 PRR18Q8N4B5 295 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 LINC01465Q8N7H1 131 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 BRIX1Q8TDN6 353 aaKnown RBP2.75□□□□□ -1.97
LINC02540-201ENST00000455554 SLC25A28Q96A46 364 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 GJB4Q9NTQ9 266 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 DDX56Q9NY93 547 aaKnown RBP2.75□□□□□ -1.97
LINC02540-201ENST00000455554 XPR1Q9UBH6 696 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 ATP8A1Q9Y2Q0 1164 aa2.75□□□□□ -1.97
LINC02540-201ENST00000455554 TNKSO95271 1327 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 SHTN1A0MZ66 631 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 PMPCBO75439 489 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 SYF2O95926 243 aaKnown RBP2.74□□□□□ -1.97
LINC02540-201ENST00000455554 FTLP02792 175 aaPredicted RBP2.74□□□□□ -1.97
LINC02540-201ENST00000455554 FGF2P09038 288 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 CYP2C9P11712 490 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 PDCP20941 246 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 TNFRSF8P28908 595 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 CPA2P48052 419 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 DIO1P49895 249 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 DGKEP52429 567 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 MAP2K6P52564 334 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 SOX8P57073 446 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 YPEL5P62699 121 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 B4GALNT1Q00973 533 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 KRT17Q04695 432 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 ITKQ08881 620 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 STIM1Q13586 685 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 KCNB1Q14721 858 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 PRTGQ2VWP7 1150 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 PLEKHG6Q3KR16 790 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 ZIK1Q3SY52 487 aaPredicted RBP2.74□□□□□ -1.97
LINC02540-201ENST00000455554 DENND2CQ68D51 928 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 ZNF324BQ6AW86 544 aaPredicted RBP2.74□□□□□ -1.97
LINC02540-201ENST00000455554 FBXL22Q6P050 247 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 ZNF793Q6ZN11 406 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 CUZD1Q86UP6 607 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 TMPRSS12Q86WS5 348 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 ZNF280BQ86YH2 543 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 C16orf71Q8IYS4 520 aaPredicted RBP2.74□□□□□ -1.97
LINC02540-201ENST00000455554 MAFAQ8NHW3 353 aaPredicted RBP2.74□□□□□ -1.97
LINC02540-201ENST00000455554 TMEM255BQ8WV15 326 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 STAG1Q8WVM7 1258 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms