RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 PSEN1P49768 467 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 RGS7P49802 495 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 EPHB3P54753 998 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 EPHA5P54756 1037 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 SLC6A3Q01959 620 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 ADIGQ0VDE8 80 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 TWF1Q12792 350 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 HYAL1Q12794 435 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 ADGRE1Q14246 886 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 VEPH1Q14D04 833 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 EFHC1Q5JVL4 640 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 FAM183BPQ6ZVS7 135 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 BHLHA9Q7RTU4 235 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 RHOT2Q8IXI1 618 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 SIX6OS1Q8N1H7 587 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 LEMD2Q8NC56 503 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 SLC7A14Q8TBB6 771 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 KIAA1524Q8TCG1 905 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 CTNNBL1Q8WYA6 563 aaPredicted RBP11.83□□□□□ -0.52
TRAF4-206ENST00000454852 CASP10Q92851 521 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 KHSRPQ92945 711 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRAF4-206ENST00000454852 TRIM44Q96DX7 344 aaPredicted RBP11.83□□□□□ -0.52
TRAF4-206ENST00000454852 LRCH3Q96II8 777 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 DESI2Q9BSY9 194 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 PACSIN1Q9BY11 444 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 LRRC3Q9BY71 257 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 TSGA10Q9BZW7 698 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 THAP2Q9H0W7 228 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 SYNCQ9H7C4 482 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 MRPL47Q9HD33 250 aaKnown RBP11.83□□□□□ -0.52
TRAF4-206ENST00000454852 MAN1C1Q9NR34 630 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 PARVAQ9NVD7 372 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 UVRAGQ9P2Y5 699 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 TJP2Q9UDY2 1190 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 CNOT8Q9UFF9 292 aaKnown RBP11.83□□□□□ -0.52
TRAF4-206ENST00000454852 LCMT1Q9UIC8 334 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 TMEM59LQ9UK28 342 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 SCINQ9Y6U3 715 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 RCCD1A6NED2 376 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 PER2O15055 1255 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 CCP110O43303 1012 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 ZSCAN12O43309 604 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 SOAT2O75908 522 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 LRG1P02750 347 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 YWHAQP27348 245 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 ARHGAP25P42331 645 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 USP46P62068 366 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 KIF5AQ12840 1032 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 MAMLD1Q13495 774 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 CTC1Q2NKJ3 1217 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 TCEAL5Q5H9L2 206 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 HABP4Q5JVS0 413 aaKnown RBP11.82□□□□□ -0.52
TRAF4-206ENST00000454852 PPM1LQ5SGD2 360 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 DNAJB7Q7Z6W7 309 aaPredicted RBP11.82□□□□□ -0.52
TRAF4-206ENST00000454852 MON1AQ86VX9 555 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 SCUBE3Q8IX30 993 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 ARHGAP18Q8N392 663 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 RNF10Q8N5U6 811 aaKnown RBP11.82□□□□□ -0.52
TRAF4-206ENST00000454852 PDZD8Q8NEN9 1154 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 VN1R2Q8NFZ6 395 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 SCAMP5Q8TAC9 235 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 FNIP1Q8TF40 1166 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 RFFLQ8WZ73 363 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 ZNF653Q96CK0 615 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 ARHGEF26Q96DR7 871 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 TRIM62Q9BVG3 475 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 ULBP1Q9BZM6 244 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 LACRTQ9GZZ8 138 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 SFXN1Q9H9B4 322 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 CLIC5Q9NZA1 410 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 UXTQ9UBK9 157 aaPredicted RBP11.82□□□□□ -0.52
TRAF4-206ENST00000454852 PYCARDQ9ULZ3 195 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 ZKSCAN5Q9Y2L8 839 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 CDH23Q9H251 3354 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 MYO7AQ13402 2215 aa11.82□□□□□ -0.52
TRAF4-206ENST00000454852 ZNF638Q14966 1978 aaKnown RBP11.81□□□□□ -0.52
TRAF4-206ENST00000454852 GOLGA6L9A6NEM1 432 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 TMEM191CA6NGB0 347 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 SOBPA7XYQ1 873 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 HSF2BPO75031 334 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 GLP2RO95838 553 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 SPATA31D3P0C874 917 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 SRGAP2BP0DMP2 458 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 LCP1P13796 627 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 HOXB8P17481 243 aaPredicted RBP11.81□□□□□ -0.52
TRAF4-206ENST00000454852 ABCB4P21439 1286 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 TUBP50607 506 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 CDR1P51861 262 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 ADAM15Q13444 863 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 C2CD6Q53TS8 623 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 CYP4A22Q5TCH4 519 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 SDHAF4Q5VUM1 108 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 OR6B2Q6IFH4 312 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 DNAJC24Q6P3W2 148 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 SPATA31D4Q6ZUB0 917 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 KIAA1328Q86T90 577 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 RBM23Q86U06 439 aaKnown RBP11.81□□□□□ -0.52
TRAF4-206ENST00000454852 TMC8Q8IU68 726 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 REXO1L1PQ8IX06 675 aa11.81□□□□□ -0.52
TRAF4-206ENST00000454852 CCAR2Q8N163 923 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms