RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TPX2Q9ULW0 747 aaKnown RBP14.28□□□□□ -0.12
CLK3-203ENST00000454830 FAM155AB1AL88 458 aaPredicted RBP14.28□□□□□ -0.12
CLK3-203ENST00000454830 MDH1P40925 334 aaKnown RBP14.28□□□□□ -0.12
CLK3-203ENST00000454830 BCAR1P56945 870 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 CCDC14Q49A88 953 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 DCAF6Q58WW2 860 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 TRNP1Q6NT89 227 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 ALKAL1Q6UXT8 129 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 ZBED8Q8IZ13 594 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 ALLCQ8N6M5 410 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 KBTBD7Q8WVZ9 684 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 SLCO2A1Q92959 643 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 AGO3Q9H9G7 860 aaKnown RBP14.28□□□□□ -0.12
CLK3-203ENST00000454830 PTGESO14684 152 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 B3GAT3O94766 335 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 YY1P25490 414 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 IVDP26440 423 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 LSP1P33241 339 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 GABRB2P47870 512 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 IFNAR2P48551 515 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 CLCNKBP51801 687 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 MAP3K7CLP57077 242 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 NME3Q13232 169 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 TFDP2Q14188 446 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 AGBL2Q5U5Z8 902 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 PIGZQ86VD9 579 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 OSTM1Q86WC4 334 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 SLC35F5Q8WV83 523 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 TRMT13Q9NUP7 481 aaKnown RBP14.28□□□□□ -0.12
CLK3-203ENST00000454830 GPR182O15218 404 aa14.27□□□□□ -0.12
CLK3-203ENST00000454830 SETSIPP0DME0 302 aa14.27□□□□□ -0.12
CLK3-203ENST00000454830 KCNE1P15382 129 aa14.27□□□□□ -0.12
CLK3-203ENST00000454830 TFE3P19532 575 aaPredicted RBP14.27□□□□□ -0.12
CLK3-203ENST00000454830 SP3Q02447 781 aa14.27□□□□□ -0.12
CLK3-203ENST00000454830 BBS12Q6ZW61 710 aa14.27□□□□□ -0.12
CLK3-203ENST00000454830 FAM131BQ86XD5 332 aa14.27□□□□□ -0.12
CLK3-203ENST00000454830 ANKRD42Q8N9B4 389 aa14.27□□□□□ -0.12
CLK3-203ENST00000454830 SLC38A7Q9NVC3 462 aa14.27□□□□□ -0.12
CLK3-203ENST00000454830 PADI3Q9ULW8 664 aa14.27□□□□□ -0.12
CLK3-203ENST00000454830 CHRNA1P02708 482 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 MAGEA4P43358 317 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 GDF10P55107 478 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 ROR1Q01973 937 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 PDIA2Q13087 525 aaKnown RBP14.27□□□□□ -0.13
CLK3-203ENST00000454830 BBS9Q3SYG4 887 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 OLFML1Q6UWY5 402 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 RAET1EQ8TD07 263 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 SNRNP25Q9BV90 132 aaKnown RBP14.27□□□□□ -0.13
CLK3-203ENST00000454830 TXLNGYQ9BZA5 131 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 STMN4Q9H169 189 aaPredicted RBP14.27□□□□□ -0.13
CLK3-203ENST00000454830 EPB41L4BQ9H329 900 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 NINJ2Q9NZG7 142 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 CTNNAL1Q9UBT7 734 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 F5H423 210 aaPredicted RBP14.27□□□□□ -0.13
CLK3-203ENST00000454830 DNALI1O14645 258 aaPredicted RBP14.27□□□□□ -0.13
CLK3-203ENST00000454830 BANF1O75531 89 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 TTC4O95801 387 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 PTPN1P18031 435 aaKnown RBP14.27□□□□□ -0.13
CLK3-203ENST00000454830 CTCFP49711 727 aaPredicted RBP14.27□□□□□ -0.13
CLK3-203ENST00000454830 IRF5Q13568 498 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 UNC45BQ8IWX7 931 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 ADAM2Q99965 735 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 OSBPL7Q9BZF2 842 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 MLXIPLQ9NP71 852 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 AAASQ9NRG9 546 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 KRT82Q9NSB4 513 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 RNF186Q9NXI6 227 aa14.27□□□□□ -0.13
CLK3-203ENST00000454830 FOXO6A8MYZ6 492 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 NUDT17P0C025 328 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 TKTP29401 623 aaKnown RBP14.26□□□□□ -0.13
CLK3-203ENST00000454830 BOLA3Q53S33 107 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 SLC4A5Q9BY07 1137 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 MIOSQ9NXC5 875 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 PCK1P35558 622 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 SULT1E1P49888 294 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 ACAP1Q15027 740 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 CA9Q16790 459 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 FAXCQ5TGI0 409 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 PAAF1Q9BRP4 392 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 ARL5CA6NH57 179 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 EBAG9O00559 213 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 KCNN4O15554 427 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 ZBED1O96006 694 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 ALDH1A1P00352 501 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 SKOR1P84550 965 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 TMED2Q15363 201 aa14.26□□□□□ -0.13
CLK3-203ENST00000454830 EXOC1LA0A1B0GW35 172 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 APOC4-APOC2K7ER74 178 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 APOL1O14791 398 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 AP1G2O75843 785 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 APOC2P02655 101 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 KLRC2P26717 231 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 NDUFV1P49821 464 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 TMEM110Q86TL2 294 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 DEFB106AQ8N104 65 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 NETO2Q8NC67 525 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 SYT15Q9BQS2 421 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 MAGEB5Q9BZ81 275 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.25□□□□□ -0.13
CLK3-203ENST00000454830 CENPUQ71F23 418 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms