RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 TMEM110Q86TL2 294 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 ANKMY2Q8IV38 441 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 FBXO16Q8IX29 292 aaPredicted RBP13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 MCUQ8NE86 351 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 SPATA18Q8TC71 538 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 DCPSQ96C86 337 aaKnown RBP13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 R3HDMLQ9H3Y0 253 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 RNPEPQ9H4A4 650 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 TLE6Q9H808 572 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 KIF9Q9HAQ2 790 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 PRDM16Q9HAZ2 1276 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 VTA1Q9NP79 307 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 XPO7Q9UIA9 1087 aaKnown RBP13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 PLXNB2O15031 1838 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 TCRBV7S3A2A0A539 114 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 KLF11O14901 512 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 ECM2O94769 699 aaPredicted RBP13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 GJB1P08034 283 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 ARF4P18085 180 aaPredicted RBP13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 KRT4P19013 534 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 GBP2P32456 591 aaPredicted RBP13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 ETV4P43268 484 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 OSTNP61366 133 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 DYNLT1P63172 113 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 GAD2Q05329 585 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 PDE4CQ08493 712 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 Q3C1V9 767 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 DCAF4L1Q3SXM0 396 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 TLDC1Q6P9B6 456 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 MAMDC4Q6UXC1 1216 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 ZNF467Q7Z7K2 595 aaPredicted RBP13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 ZNF410Q86VK4 478 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 PALM2Q8IXS6 379 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 C4orf33Q8N1A6 199 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 FAM71DQ8N9W8 422 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 PPTC7Q8NI37 304 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 RXFP2Q8WXD0 754 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 ANKRD27Q96NW4 1050 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 ZNF670Q9BS34 389 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 NT5C1AQ9BXI3 368 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 MYLK2Q9H1R3 596 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 SAE1Q9UBE0 346 aaPredicted RBP13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 BAIAP2L1Q9UHR4 511 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 LNPEPQ9UIQ6 1025 aa13.06□□□□□ -0.32
ECHDC1-209ENST00000454591 A0A087WZ62 844 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 PRPSAP2O60256 369 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 TSPAN1O60635 241 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 KRT16P08779 473 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 FGFR1P11362 822 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 PDGFRAP16234 1089 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 IL4RP24394 825 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 PRKCHP24723 683 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 PTPN9P43378 593 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 NDST1P52848 882 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 CDH6P55285 790 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 CDK18Q07002 472 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 PRKG1Q13976 671 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 PCBP1Q15365 356 aaKnown RBP eCLIP13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 TAF5Q15542 800 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 TMEM132AQ24JP5 1023 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 BBS9Q3SYG4 887 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 MAP1SQ66K74 1059 aaPredicted RBP13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 ARHGAP17Q68EM7 881 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 TAPT1Q6NXT6 567 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 OLFML1Q6UWY5 402 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 FAM47EQ6ZV65 393 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 FAM183BPQ6ZVS7 135 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 CYS1Q717R9 158 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 OTOAQ7RTW8 1153 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 UNC93AQ86WB7 457 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 SULF1Q8IWU6 871 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 PLD5Q8N7P1 536 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 COPS5Q92905 334 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 KHSRPQ92945 711 aaKnown RBP eCLIP13.05□□□□□ -0.322e-12■■■□□ 17
ECHDC1-209ENST00000454591 OTUD5Q96G74 571 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 APOPT1Q96IL0 206 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 HEXIM2Q96MH2 286 aaKnown RBP13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 LRRC37BQ96QE4 947 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 TSPAN18Q96SJ8 248 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 FDXACB1Q9BRP7 624 aaPredicted RBP13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 TUBB6Q9BUF5 446 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 ELP3Q9H9T3 547 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 DPP3Q9NY33 737 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 CNTN3Q9P232 1028 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 PCSK1NQ9UHG2 260 aa13.05□□□□□ -0.32
ECHDC1-209ENST00000454591 TCRBV9S1A1TA0A576 114 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 UNCXA6NJT0 531 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 DNAJC6O75061 913 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 BANF1O75531 89 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 TROVE2P10155 538 aaKnown RBP eCLIP13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 TPSB2P20231 275 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 CCNFP41002 786 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 ELK3P41970 407 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 MAGEA3P43357 314 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 RASSF2P50749 326 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 ZNF200P98182 395 aaPredicted RBP13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 SLC6A3Q01959 620 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 TPSAB1Q15661 275 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 ZBTB6Q15916 424 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms