RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 TRAPPC11Q7Z392 1133 aa12.42□□□□□ -0.42
HERC3-207ENST00000452979 PIP4P1Q86T03 277 aa12.42□□□□□ -0.42
HERC3-207ENST00000452979 C12orf40Q86WS4 652 aa12.42□□□□□ -0.42
HERC3-207ENST00000452979 DDX42Q86XP3 938 aaKnown RBP eCLIP12.42□□□□□ -0.42
HERC3-207ENST00000452979 CBWD2Q8IUF1 395 aa12.42□□□□□ -0.42
HERC3-207ENST00000452979 TMEFF1Q8IYR6 380 aa12.42□□□□□ -0.42
HERC3-207ENST00000452979 RLN3Q8WXF3 142 aa12.42□□□□□ -0.42
HERC3-207ENST00000452979 SPACA7Q96KW9 195 aa12.42□□□□□ -0.42
HERC3-207ENST00000452979 MRPL45Q9BRJ2 306 aaKnown RBP12.42□□□□□ -0.42
HERC3-207ENST00000452979 NUSAP1Q9BXS6 441 aaKnown RBP12.42□□□□□ -0.42
HERC3-207ENST00000452979 ARHGEF4Q9NR80 690 aa12.42□□□□□ -0.42
HERC3-207ENST00000452979 TMEM30AQ9NV96 361 aa12.42□□□□□ -0.42
HERC3-207ENST00000452979 CFAP97Q9P2B7 532 aa12.42□□□□□ -0.42
HERC3-207ENST00000452979 NEUROG3Q9Y4Z2 214 aa12.42□□□□□ -0.42
HERC3-207ENST00000452979 ADAMTS9Q9P2N4 1935 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 ASCC3Q8N3C0 2202 aaKnown RBP12.41□□□□□ -0.42
HERC3-207ENST00000452979 AKAP13Q12802 2813 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 A0A087X0B3 334 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 FAM221BA6H8Z2 402 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 STAU1O95793 577 aaKnown RBP12.41□□□□□ -0.42
HERC3-207ENST00000452979 ABL1P00519 1130 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 ADH5P11766 374 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 ENGP17813 658 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 PTPN1P18031 435 aaKnown RBP12.41□□□□□ -0.42
HERC3-207ENST00000452979 STAT6P42226 847 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 CACNA2D1P54289 1103 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 GAD2Q05329 585 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 STXBP4Q6ZWJ1 553 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 HS2ST1Q7LGA3 356 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 TTC30AQ86WT1 665 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 ETFBKMTQ8IXQ9 262 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 CCDC65Q8IXS2 484 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 NUP93Q8N1F7 819 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 ZNF507Q8TCN5 953 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 NOC3LQ8WTT2 800 aaKnown RBP12.41□□□□□ -0.42
HERC3-207ENST00000452979 OVCA2Q8WZ82 227 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 OTUB2Q96DC9 234 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 ZFRQ96KR1 1074 aaKnown RBP12.41□□□□□ -0.42
HERC3-207ENST00000452979 SLITRK1Q96PX8 696 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 MMS19Q96T76 1030 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 ELOVL4Q9GZR5 314 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 SNX25Q9H3E2 840 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 SLC32A1Q9H598 525 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 SMPD4Q9NXE4 827 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 IL37Q9NZH6 218 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 HSPBP1Q9NZL4 362 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 SLC6A14Q9UN76 642 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 STARD13Q9Y3M8 1113 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 PCNX2A6NKB5 2137 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 PI4KAP42356 2102 aa12.41□□□□□ -0.42
HERC3-207ENST00000452979 PCDH15Q96QU1 1955 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 SRRM3A6NNA2 597 aaPredicted RBP12.4□□□□□ -0.42
HERC3-207ENST00000452979 HOXC11O43248 304 aaPredicted RBP12.4□□□□□ -0.42
HERC3-207ENST00000452979 RTN3O95197 1032 aaPredicted RBP12.4□□□□□ -0.42
HERC3-207ENST00000452979 MBL2P11226 248 aaPredicted RBP12.4□□□□□ -0.42
HERC3-207ENST00000452979 PDIA4P13667 645 aaKnown RBP12.4□□□□□ -0.42
HERC3-207ENST00000452979 YWHAQP27348 245 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 NUCB2P80303 420 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 PREPLQ4J6C6 727 aaPredicted RBP12.4□□□□□ -0.42
HERC3-207ENST00000452979 LY6G5CQ5SRR4 150 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 LYSMD4Q5XG99 296 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 EPM2AIP1Q7L775 607 aaPredicted RBP12.4□□□□□ -0.42
HERC3-207ENST00000452979 GLIS3Q8NEA6 775 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 PDZD8Q8NEN9 1154 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 OR6B3Q8NGW1 331 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 CEP76Q8TAP6 659 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 B3GNT5Q9BYG0 378 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 PANK2Q9BZ23 570 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 ZSCAN16Q9H4T2 348 aaPredicted RBP12.4□□□□□ -0.42
HERC3-207ENST00000452979 CHMP5Q9NZZ3 219 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 BCCIPQ9P287 314 aaKnown RBP eCLIP12.4□□□□□ -0.42
HERC3-207ENST00000452979 MSRB2Q9Y3D2 182 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 FAM208BQ5VWN6 2430 aa12.4□□□□□ -0.42
HERC3-207ENST00000452979 MYO18AQ92614 2054 aaKnown RBP12.39□□□□□ -0.43
HERC3-207ENST00000452979 TCRBV21S2A2A0A5A6 115 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 FAM92AA1XBS5 289 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 SCAMP3O14828 347 aaKnown RBP12.39□□□□□ -0.43
HERC3-207ENST00000452979 EIF3DO15371 548 aaKnown RBP eCLIP12.39□□□□□ -0.43
HERC3-207ENST00000452979 TGFB1I1O43294 461 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 AP5Z1O43299 807 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 COCHO43405 550 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 TULP3O75386 442 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 SERPINF2P08697 491 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 ITPKAP23677 461 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 MAPK8P45983 427 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 TUBP50607 506 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 SNRPFP62306 86 aaKnown RBP12.39□□□□□ -0.43
HERC3-207ENST00000452979 PSMD6Q15008 389 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 SLC39A14Q15043 492 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 SNRNP35Q16560 246 aaKnown RBP12.39□□□□□ -0.43
HERC3-207ENST00000452979 DUOXA1Q1HG43 343 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 WDR72Q3MJ13 1102 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 FOXD4L6Q3SYB3 417 aaPredicted RBP12.39□□□□□ -0.43
HERC3-207ENST00000452979 HECTD3Q5T447 861 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 FOXD4L3Q6VB84 417 aaPredicted RBP12.39□□□□□ -0.43
HERC3-207ENST00000452979 SLC36A4Q6YBV0 504 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 ARMCX6Q7L4S7 300 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 TRMT11Q7Z4G4 463 aaKnown RBP12.39□□□□□ -0.43
HERC3-207ENST00000452979 PGBD3Q8N328 593 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 B3GALNT2Q8NCR0 500 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms