RNA–Protein interactions for RNA: ENST00000452724.1

USP40-209, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-209ENST00000452724 RHBDL3P58872 404 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 BMPR2Q13873 1038 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 CCNIQ14094 377 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 ARL13BQ3SXY8 428 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 TREML2Q5T2D2 321 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 TSTD2Q5T7W7 516 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 XRRA1Q6P2D8 792 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 CATSPERGQ6ZRH7 1159 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 MORC1Q86VD1 984 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 IZUMO1Q8IYV9 350 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 SAMD3Q8N6K7 520 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 VGLL2Q8N8G2 317 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 FANCBQ8NB91 859 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 DEPTORQ8TB45 409 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 LRRC46Q96FV0 321 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 SLC39A13Q96H72 371 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 MPHOSPH6Q99547 160 aaKnown RBP4.78□□□□□ -1.64
USP40-209ENST00000452724 INO80BQ9C086 356 aaPredicted RBP4.78□□□□□ -1.64
USP40-209ENST00000452724 HEYLQ9NQ87 328 aaPredicted RBP4.78□□□□□ -1.64
USP40-209ENST00000452724 CAPN11Q9UMQ6 739 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 WNT6Q9Y6F9 365 aa4.78□□□□□ -1.64
USP40-209ENST00000452724 ONECUT2O95948 504 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 FESP07332 822 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 MYL4P12829 197 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 HGFP14210 728 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 SERPINB3P29508 390 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 HTR3AP46098 478 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 BTKQ06187 659 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 STK3Q13188 491 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 KCNAB1Q14722 419 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 LY6KQ17RY6 165 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 SLC35G1Q2M3R5 365 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 PLAC9Q5JTB6 97 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 KIAA1614Q5VZ46 1190 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 KRT28Q7Z3Y7 464 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 SRRM1Q8IYB3 904 aaKnown RBP4.77□□□□□ -1.65
USP40-209ENST00000452724 TXLNBQ8N3L3 684 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 CCDC150Q8NCX0 1101 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 ACRBPQ8NEB7 543 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 KIAA1191Q96A73 305 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 R3HDM4Q96D70 268 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 C17orf80Q9BSJ5 609 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 MAGEB5Q9BZ81 275 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 AS3MTQ9HBK9 375 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 SH2B3Q9UQQ2 575 aa4.77□□□□□ -1.65
USP40-209ENST00000452724 A0A087WZ62 844 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 LINC00473A8K010 186 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 VNN1O95497 513 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 PCSK6P29122 969 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 EPHA3P29320 983 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 UQCRC1P31930 480 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 ALDH9A1P49189 494 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 SRSF4Q08170 494 aaKnown RBP4.76□□□□□ -1.65
USP40-209ENST00000452724 DGKKQ5KSL6 1271 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 SLC9A4Q6AI14 798 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 MZT2AQ6P582 158 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 ZNF788Q6ZQV5 615 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 TOGARAM2Q6ZUX3 1019 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 ZNF551Q7Z340 670 aaPredicted RBP4.76□□□□□ -1.65
USP40-209ENST00000452724 CAND1Q86VP6 1230 aaKnown RBP4.76□□□□□ -1.65
USP40-209ENST00000452724 SOCS4Q8WXH5 440 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 ZNF668Q96K58 619 aaPredicted RBP4.76□□□□□ -1.65
USP40-209ENST00000452724 HAPLN3Q96S86 360 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 EIF2AQ9BY44 585 aaKnown RBP4.76□□□□□ -1.65
USP40-209ENST00000452724 ARHGEF3Q9NR81 526 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 HPSEQ9Y251 543 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 MAN2B2Q9Y2E5 1009 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 CEP83Q9Y592 693 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 PCDHGB2Q9Y5G2 931 aa4.76□□□□□ -1.65
USP40-209ENST00000452724 TTLL1O95922 423 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 ELFN1P0C7U0 828 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 EBLN1P0CF75 366 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 ABCB4P21439 1286 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 EEF1GP26641 437 aaKnown RBP4.75□□□□□ -1.65
USP40-209ENST00000452724 ABCG1P45844 678 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 HSPA7P48741 367 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 MTHFSP49914 203 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 PGDP52209 483 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 COPAP53621 1224 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 PDE1AP54750 535 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 TIAL1Q01085 375 aaKnown RBP eCLIP4.75□□□□□ -1.65
USP40-209ENST00000452724 FOXF2Q12947 444 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 HNRNPA0Q13151 305 aaKnown RBP4.75□□□□□ -1.65
USP40-209ENST00000452724 MPEG1Q2M385 716 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 MANEALQ5VSG8 457 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 LRRC71Q8N4P6 559 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 HASPINQ8TF76 798 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 XAGE5Q8WWM1 108 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 ZNF566Q969W8 418 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 ZBTB45Q96K62 511 aaPredicted RBP4.75□□□□□ -1.65
USP40-209ENST00000452724 ARFGAP3Q9NP61 516 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 SERTAD4Q9NUC0 356 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 DNAJB11Q9UBS4 358 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 USP22Q9UPT9 525 aa4.75□□□□□ -1.65
USP40-209ENST00000452724 DRG1Q9Y295 367 aaKnown RBP4.75□□□□□ -1.65
USP40-209ENST00000452724 KCNQ3O43525 872 aa4.74□□□□□ -1.65
USP40-209ENST00000452724 SETSIPP0DME0 302 aa4.74□□□□□ -1.65
USP40-209ENST00000452724 IDEP14735 1019 aa4.74□□□□□ -1.65
USP40-209ENST00000452724 JUPP14923 745 aa4.74□□□□□ -1.65
USP40-209ENST00000452724 NDUFB7P17568 137 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms