RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 OLIG1Q8TAK6 271 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 GOLGA5Q8TBA6 731 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 SCFD1Q8WVM8 642 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 CCDC127Q96BQ5 260 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 DHX58Q96C10 678 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 CHAMP1Q96JM3 812 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 PNKPQ96T60 521 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 C7orf25Q9BPX7 421 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 TPSD1Q9BZJ3 242 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 ZNF518BQ9C0D4 1074 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 RNF38Q9H0F5 515 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 TMEM30AQ9NV96 361 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 SMPD4Q9NXE4 827 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 NME7Q9Y5B8 376 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 MYO18AQ92614 2054 aaKnown RBP11.58□□□□□ -0.56
USP1-204ENST00000452143 PI4KAP42356 2102 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 A0A0A0MRY4 1105 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 E2F8A0AVK6 867 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 KAT7O95251 611 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 ABL1P00519 1130 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 APODP05090 189 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 MBL2P11226 248 aaPredicted RBP11.57□□□□□ -0.56
USP1-204ENST00000452143 CHRM1P11229 460 aaPredicted RBP11.57□□□□□ -0.56
USP1-204ENST00000452143 ADH5P11766 374 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 YWHAQP27348 245 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 GRIA2P42262 883 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 CYP2J2P51589 502 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 AP3M2P53677 418 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 CACNA2D1P54289 1103 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 PREPLQ4J6C6 727 aaPredicted RBP11.57□□□□□ -0.56
USP1-204ENST00000452143 SNX30Q5VWJ9 437 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 DAB2IPQ5VWQ8 1189 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 PSAPL1Q6NUJ1 521 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 CYP2U1Q7Z449 544 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 NUP93Q8N1F7 819 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 RDH13Q8NBN7 331 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 WHAMMQ8TF30 809 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 SPACA7Q96KW9 195 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 GZF1Q9H116 711 aaPredicted RBP11.57□□□□□ -0.56
USP1-204ENST00000452143 XYLT2Q9H1B5 865 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 DPEP3Q9H4B8 488 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 POLMQ9NP87 494 aaPredicted RBP11.57□□□□□ -0.56
USP1-204ENST00000452143 DMAP1Q9NPF5 467 aaPredicted RBP11.57□□□□□ -0.56
USP1-204ENST00000452143 CFAP97Q9P2B7 532 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 WDFY3Q8IZQ1 3526 aa11.57□□□□□ -0.56
USP1-204ENST00000452143 CEP192Q8TEP8 1941 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 PVALEFA0A1B0GWK0 134 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 FAM92AA1XBS5 289 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 KHNYNO15037 678 aaKnown RBP11.56□□□□□ -0.56
USP1-204ENST00000452143 PDIA4P13667 645 aaKnown RBP11.56□□□□□ -0.56
USP1-204ENST00000452143 P2RY2P41231 377 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 DPP6P42658 865 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 MYL6P60660 151 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 CLDN10P78369 228 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 KNOP1Q1ED39 458 aaKnown RBP11.56□□□□□ -0.56
USP1-204ENST00000452143 ZNF699Q32M78 642 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 SPDYCQ5MJ68 293 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 EOGTQ5NDL2 527 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 RHBDF2Q6PJF5 856 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 SHC4Q6S5L8 630 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 TRMT11Q7Z4G4 463 aaKnown RBP11.56□□□□□ -0.56
USP1-204ENST00000452143 FAM35AQ86V20 835 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 NELFCDQ8IXH7 590 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 ALLCQ8N6M5 410 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 IL17RCQ8NAC3 791 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 KCNV2Q8TDN2 545 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 TMEM174Q8WUU8 243 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 FBXO32Q969P5 355 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 SMARCD1Q96GM5 515 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 TNIP3Q96KP6 325 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 ZFRQ96KR1 1074 aaKnown RBP11.56□□□□□ -0.56
USP1-204ENST00000452143 B3GNT5Q9BYG0 378 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 TMEM9BQ9NQ34 198 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 ARHGEF4Q9NR80 690 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 COMMD8Q9NX08 183 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 TFIP11Q9UBB9 837 aaKnown RBP11.56□□□□□ -0.56
USP1-204ENST00000452143 NXF1Q9UBU9 619 aaKnown RBP11.56□□□□□ -0.56
USP1-204ENST00000452143 EVLQ9UI08 416 aaPredicted RBP11.56□□□□□ -0.56
USP1-204ENST00000452143 AKAP13Q12802 2813 aa11.56□□□□□ -0.56
USP1-204ENST00000452143 ASCC3Q8N3C0 2202 aaKnown RBP11.56□□□□□ -0.56
USP1-204ENST00000452143 ZFYVE26Q68DK2 2539 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 C4orf47A7E2U8 309 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 SGK1O00141 431 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 TNFRSF10BO14763 440 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 CLIC2O15247 247 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 HOXC11O43248 304 aaPredicted RBP11.55□□□□□ -0.56
USP1-204ENST00000452143 COCHO43405 550 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 EXOC3O60645 756 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 PHACTR2O75167 634 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 KLF8O95600 359 aaPredicted RBP11.55□□□□□ -0.56
USP1-204ENST00000452143 P4HA1P13674 534 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 CSRP1P21291 193 aaKnown RBP11.55□□□□□ -0.56
USP1-204ENST00000452143 BCKDHBP21953 392 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 HOXD12P35452 270 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 TNFRSF4P43489 277 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 KIR2DL1P43626 348 aaPredicted RBP11.55□□□□□ -0.56
USP1-204ENST00000452143 NOVA1P51513 510 aaKnown RBP11.55□□□□□ -0.56
USP1-204ENST00000452143 SLC5A3P53794 718 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 GAD2Q05329 585 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 IFRD2Q12894 506 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms