RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 DENND5BQ6ZUT9 1274 aa18.07■□□□□ 0.48
PRPF40A-204ENST00000450303 MED10Q9BTT4 135 aa18.07■□□□□ 0.48
PRPF40A-204ENST00000450303 EBF3Q9H4W6 596 aa18.07■□□□□ 0.48
PRPF40A-204ENST00000450303 MYH10P35580 1976 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 TRAV19A0A0A6YYK7 116 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 CKMP06732 381 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 USP17L7P0C7H9 530 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 ARSAP15289 507 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 CTHP32929 405 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 PIK3CAP42336 1068 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 MLLT6P55198 1093 aaPredicted RBP18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 NR1I3Q14994 352 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 ITPRIPL2Q3MIP1 535 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 WDR44Q5JSH3 913 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 APTXQ7Z2E3 356 aaKnown RBP18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 ACOT1Q86TX2 421 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 FBXL13Q8NEE6 735 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 C8orf48Q96LL4 319 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 NAP1L5Q96NT1 182 aaPredicted RBP18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 FAM83CQ9BQN1 747 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 IMPG2Q9BZV3 1241 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 CHRDQ9H2X0 955 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 HPS4Q9NQG7 708 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 GCNT4Q9P109 453 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 FBXO4Q9UKT5 387 aa18.06■□□□□ 0.48
PRPF40A-204ENST00000450303 SOBPA7XYQ1 873 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 ADCY5O95622 1261 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 ABL1P00519 1130 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 HDCP19113 662 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 RUNX3Q13761 415 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 EXOC3L4Q17RC7 722 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 CBWD6Q4V339 395 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 CBWD3Q5JTY5 395 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 CBWD5Q5RIA9 395 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 CC2D1AQ6P1N0 951 aaPredicted RBP18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 PAQR9Q6ZVX9 377 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 RALGPS2Q86X27 583 aaPredicted RBP18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 PCMTD1Q96MG8 357 aaPredicted RBP18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 KCNK16Q96T55 309 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 XPO4Q9C0E2 1151 aaKnown RBP18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 ELOVL4Q9GZR5 314 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 KIF9Q9HAQ2 790 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 TRPM5Q9NZQ8 1165 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 HMGXB4Q9UGU5 601 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 USP34Q70CQ2 3546 aa18.05■□□□□ 0.48
PRPF40A-204ENST00000450303 HELZP42694 1942 aaKnown RBP18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 ATG2BQ96BY7 2078 aa18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 OTOL1A6NHN0 477 aaPredicted RBP18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 ASS1P00966 412 aaKnown RBP18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 P4HA1P13674 534 aa18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 NDST1P52848 882 aa18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 TAF10Q12962 218 aa18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 GAS6Q14393 721 aa18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 ZNF268Q14587 947 aaPredicted RBP18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 FAM35AQ86V20 835 aa18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 TAS1R2Q8TE23 839 aa18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 TAF4BQ92750 862 aa18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 MSANTD3Q96H12 275 aa18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 TTLL2Q9BWV7 592 aa18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 APOBEC3GQ9HC16 384 aaKnown RBP18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 RRAGDQ9NQL2 400 aaPredicted RBP18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 RAB20Q9NX57 234 aa18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 COQ4Q9Y3A0 265 aa18.04■□□□□ 0.48
PRPF40A-204ENST00000450303 MYO15AQ9UKN7 3530 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 PTPRZ1P23471 2315 aaPredicted RBP18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 A0A1W2PQC6 194 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 LMNAP02545 664 aaKnown RBP18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 CCDC130P13994 396 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 ASPAP45381 313 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 NOP14P78316 857 aaKnown RBP18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 MTF1Q14872 753 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 ZNF77Q15935 545 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 ZNF528Q3MIS6 628 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 ZC3H14Q6PJT7 736 aaKnown RBP18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 Q6ZS52 159 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 EHBP1Q8NDI1 1231 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 SH3RF2Q8TEC5 729 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 TNIP3Q96KP6 325 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 CEP295NLQ96MC4 621 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 ERGIC2Q96RQ1 377 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 FAM49BQ9NUQ9 324 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 WNT6Q9Y6F9 365 aa18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 RIF1Q5UIP0 2472 aaKnown RBP18.03■□□□□ 0.48
PRPF40A-204ENST00000450303 ZNF840PA6NDX5 716 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 TEX33O43247 280 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 AP1G2O75843 785 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 ZNF75DP51815 510 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 ZXDBP98169 803 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 SATB1Q01826 763 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 LRRC32Q14392 662 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 C1orf228Q6PIY5 440 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 FUKQ8N0W3 1084 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 NUP93Q8N1F7 819 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 C12orf29Q8N999 325 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 SCAMP5Q8TAC9 235 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 MRFAP1L1Q96HT8 127 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 FAM81BQ96LP2 452 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 TWNKQ96RR1 684 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 RNF38Q9H0F5 515 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 LINC00597Q9H2U6 94 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms