RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SERPINA6P08185 405 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 KLRC2P26717 231 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 HSPA13P48723 471 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 FMO5P49326 533 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 PDK1Q15118 436 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 CLEC16AQ2KHT3 1053 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 PUS10Q3MIT2 529 aaKnown RBP8.96□□□□□ -0.97
LSM5-208ENST00000450169 ARL13BQ3SXY8 428 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 TCHHL1Q5QJ38 904 aaPredicted RBP8.96□□□□□ -0.97
LSM5-208ENST00000450169 NANOGP8Q6NSW7 305 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 GSTA5Q7RTV2 222 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 ARID3BQ8IVW6 561 aaPredicted RBP8.96□□□□□ -0.97
LSM5-208ENST00000450169 CATSPER1Q8NEC5 780 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 MZB1Q8WU39 189 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 EFHD2Q96C19 240 aaPredicted RBP8.96□□□□□ -0.97
LSM5-208ENST00000450169 NLRP4Q96MN2 994 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 RILPQ96NA2 401 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 FAM118BQ9BPY3 351 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 DCUN1D5Q9BTE7 237 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 INTS2Q9H0H0 1204 aaKnown RBP8.96□□□□□ -0.97
LSM5-208ENST00000450169 MAN1C1Q9NR34 630 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 OLFML3Q9NRN5 406 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 GID8Q9NWU2 228 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 TMEM260Q9NX78 707 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 FETUBQ9UGM5 382 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 PSMD13Q9UNM6 376 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 KIAA1024Q9UPX6 916 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 CARD8Q9Y2G2 431 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 RBMX2Q9Y388 322 aaKnown RBP8.96□□□□□ -0.97
LSM5-208ENST00000450169 TTLL3Q9Y4R7 772 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 UBR2Q8IWV8 1755 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 XPO1O14980 1071 aaKnown RBP8.96□□□□□ -0.98
LSM5-208ENST00000450169 MGEA5O60502 916 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 FOXD2O60548 495 aaPredicted RBP8.96□□□□□ -0.98
LSM5-208ENST00000450169 ATP5BP06576 529 aaKnown RBP8.96□□□□□ -0.98
LSM5-208ENST00000450169 GSSP48637 474 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 COPAP53621 1224 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 AQP5P55064 265 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 YWHAGP61981 247 aaKnown RBP eCLIP8.96□□□□□ -0.98
LSM5-208ENST00000450169 PTK7Q13308 1070 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 CCNG2Q16589 344 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 NDUFA5Q16718 116 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 PHKG1Q16816 387 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 IL23RQ5VWK5 629 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 ADGRD1Q6QNK2 874 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 KRT27Q7Z3Y8 459 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 WDR75Q8IWA0 830 aaKnown RBP8.96□□□□□ -0.98
LSM5-208ENST00000450169 GALNT4Q8N4A0 578 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 ETNPPLQ8TBG4 499 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 HSPH1Q92598 858 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 BHMTQ93088 406 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 THAP11Q96EK4 314 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 LRGUKQ96M69 825 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 C7orf26Q96N11 449 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 KCNK17Q96T54 332 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 PAFAH2Q99487 392 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 VTA1Q9NP79 307 aa8.96□□□□□ -0.98
LSM5-208ENST00000450169 HERC5Q9UII4 1024 aaKnown RBP8.96□□□□□ -0.98
LSM5-208ENST00000450169 CTDP1Q9Y5B0 961 aaPredicted RBP8.96□□□□□ -0.98
LSM5-208ENST00000450169 PAPPAQ13219 1627 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 CICQ96RK0 1608 aaPredicted RBP8.95□□□□□ -0.98
LSM5-208ENST00000450169 ATP2A1O14983 1001 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 CLIC2O15247 247 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 ALOX15BO15296 676 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 AQP9O43315 295 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 SULT1C4O75897 302 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 PROCP04070 461 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 PTPN2P17706 415 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 ADSSP30520 456 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 CCDC142Q17RM4 750 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 RGS21Q2M5E4 152 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 HYIQ5T013 277 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 EGFLAMQ63HQ2 1017 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 GPR180Q86V85 440 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 HPS6Q86YV9 775 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 TMEM126BQ8IUX1 230 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 CCDC33Q8N5R6 958 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 ISOC1Q96CN7 298 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 APOPT1Q96IL0 206 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 ACAP3Q96P50 834 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 UNKQ9C0B0 810 aaKnown RBP8.95□□□□□ -0.98
LSM5-208ENST00000450169 CCDC68Q9H2F9 335 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 CYP4F11Q9HBI6 524 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 PALMDQ9NP74 551 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 VPS45Q9NRW7 570 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 NCKIPSDQ9NZQ3 722 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 CNTN3Q9P232 1028 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 EBF1Q9UH73 591 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 RABGEF1Q9UJ41 708 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 SORCS3Q9UPU3 1222 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 SNX9Q9Y5X1 595 aa8.95□□□□□ -0.98
LSM5-208ENST00000450169 COL16A1Q07092 1604 aaPredicted RBP8.95□□□□□ -0.98
LSM5-208ENST00000450169 DYTNA2CJ06 578 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 TMEM114B3SHH9 223 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 DNALI1O14645 258 aaPredicted RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 PFDN6O15212 129 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 KDM1AO60341 852 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 UGT1A9O60656 530 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 SIN3BO75182 1162 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 PIAS1O75925 651 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms