RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 ERCC6LQ2NKX8 1250 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 BOLA3Q53S33 107 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 DCAF6Q58WW2 860 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 RTP2Q5QGT7 225 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 C8orf74Q6P047 294 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 SND1Q7KZF4 910 aaKnown RBP eCLIP10.14□□□□□ -0.79
RFC4-210ENST00000449502 ARCQ7LC44 396 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 ZNF572Q7Z3I7 529 aaPredicted RBP10.14□□□□□ -0.79
RFC4-210ENST00000449502 POLNQ7Z5Q5 900 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 MAP7D3Q8IWC1 876 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 KLHL7Q8IXQ5 586 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 DEFB106AQ8N104 65 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 SLC39A11Q8N1S5 342 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 ARHGAP18Q8N392 663 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 GPR161Q8N6U8 529 aaKnown RBP10.14□□□□□ -0.79
RFC4-210ENST00000449502 KCTD6Q8NC69 237 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 LRRN4CLQ8ND94 238 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 EXD1Q8NHP7 514 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 CCDC26Q8TAB7 109 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 FAM172AQ8WUF8 416 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 HERVK_113Q902F9 699 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 ALG3Q92685 438 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 VWCEQ96DN2 955 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 C8orf48Q96LL4 319 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 CFAP57Q96MR6 1250 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 RUNDC3BQ96NL0 473 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 PKMYT1Q99640 499 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 AP1M1Q9BXS5 423 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 MAK16Q9BXY0 300 aaKnown RBP10.14□□□□□ -0.79
RFC4-210ENST00000449502 RHOBTB2Q9BYZ6 727 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 FBXO44Q9H4M3 255 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 POPDC2Q9HBU9 364 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 RRN3Q9NYV6 651 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 SMARCAL1Q9NZC9 954 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 MTRRQ9UBK8 725 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 PCSK1NQ9UHG2 260 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 BACE2Q9Y5Z0 518 aa10.14□□□□□ -0.79
RFC4-210ENST00000449502 LRRD1A4D1F6 860 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 LPXNO60711 386 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 LRCH4O75427 683 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 TJP3O95049 919 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 GJB5O95377 273 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 TRUB2O95900 331 aaKnown RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 RHOXF2BP0C7M4 288 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 NCAM1P13591 858 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 ATP2A2P16615 1042 aaKnown RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 MIPP30301 263 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 GBP1P32455 592 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 ELF1P32519 619 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 FLT3P36888 993 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 PTPN9P43378 593 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 TUFMP49411 452 aaKnown RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 NDUFV1P49821 464 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 RABGGTBP53611 331 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 SLC5A3P53794 718 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 DAOAP59103 153 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 COPS2P61201 443 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 ADCY1Q08828 1119 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 ZNF252P-AS1Q0IIN9 211 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 TAF12Q16514 161 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 C15orf59Q2T9L4 293 aaPredicted RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 CCDC14Q49A88 953 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 GLE1Q53GS7 698 aaKnown RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 RAB41Q5JT25 222 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 TMEM240Q5SV17 173 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 BTBD8Q5XKL5 378 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 PRSS55Q6UWB4 352 aaPredicted RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 TAS1R1Q7RTX1 841 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 MAATS1Q7Z4T9 603 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 ADAT2Q7Z6V5 191 aaKnown RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 DDX53Q86TM3 631 aaKnown RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 TMEM173Q86WV6 379 aaPredicted RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 CPNE8Q86YQ8 564 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 SLC13A5Q86YT5 568 aaPredicted RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 HERC6Q8IVU3 1022 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 NUP93Q8N1F7 819 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 MMGT1Q8N4V1 131 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 ATAD1Q8NBU5 361 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 FBXO22Q8NEZ5 403 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 ZMIZ2Q8NF64 920 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 SLC7A14Q8TBB6 771 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 CLEC4CQ8WTT0 213 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 BCL7CQ8WUZ0 217 aaPredicted RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 PIK3R5Q8WYR1 880 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 HSPH1Q92598 858 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 RNF25Q96BH1 459 aaPredicted RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 KRT12Q99456 494 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 RAD9AQ99638 391 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 RHOXF2Q9BQY4 288 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 DDX23Q9BUQ8 820 aaKnown RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 FAM204AQ9H8W3 233 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.13□□□□□ -0.79
RFC4-210ENST00000449502 MRPL17Q9NRX2 175 aaKnown RBP10.13□□□□□ -0.79
RFC4-210ENST00000449502 HOMER3Q9NSC5 361 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 EHD2Q9NZN4 543 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 USP18Q9UMW8 372 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 NR2E3Q9Y5X4 410 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 CDY1Q9Y6F8 540 aa10.13□□□□□ -0.79
RFC4-210ENST00000449502 SYNJ2BP-COX16A0A087WUM0 186 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 MTMR11A4FU01 709 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms