RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 RUSC1Q9BVN2 902 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 FSD1LQ9BXM9 530 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 CFHR5Q9BXR6 569 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 CATSPERBQ9H7T0 1116 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 VPS37BQ9H9H4 285 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 C6orf203Q9P0P8 240 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 KIAA1468Q9P260 1216 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZNF510Q9Y2H8 683 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 CAPN8A6NHC0 703 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 SLC38A8A6NNN8 435 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 LACTBL1A8MY62 500 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 SOD2P04179 222 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 HOXB2P14652 356 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 LPIN1Q14693 890 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 GRIN2CQ14957 1233 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 GOLGA7BQ2TAP0 167 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 WSCD1Q658N2 575 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 PASD1Q8IV76 773 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 FAM126BQ8IXS8 530 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ARL14Q8N4G2 192 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 CFAP61Q8NHU2 1237 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 CDC26Q8NHZ8 85 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 OR8D1Q8WZ84 308 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 LRIG1Q96JA1 1093 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZFP42Q96MM3 310 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZWILCHQ9H900 591 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 GTF3C4Q9UKN8 822 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 CDH9Q9ULB4 789 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 FAM95CA0A1B0GW59 222 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 SYF2O95926 243 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 TNNI3P19429 210 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 BLKP51451 505 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ITGB3BPQ13352 177 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 SPIDRQ14159 915 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 NCAPHQ15003 741 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 TMEM259Q4ZIN3 620 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 C10orf76Q5T2E6 689 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 SPATA1Q5VX52 437 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 TAS2R42Q7RTR8 314 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 MFN1Q8IWA4 741 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 COLGALT1Q8NBJ5 622 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 IGSF21Q96ID5 467 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 PHF7Q9BWX1 381 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 CDT1Q9H211 546 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ELAC1Q9H777 363 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 RNF19AQ9NV58 838 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 DNAJC12Q9UKB3 198 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 PEAK1Q9H792 1746 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 BRWD3Q6RI45 1802 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ATXN7O15265 892 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 PSMD10O75832 226 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 GFPT2O94808 682 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 RBPJQ06330 500 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 TMEM240Q5SV17 173 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 FBXL6Q8N531 539 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 C11orf70Q9BRQ4 267 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 TRIM9Q9C026 710 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZDHHC4Q9NPG8 344 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 SYNDIG1LA6NDD5 238 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 IFRD1O00458 451 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 FFAR2O15552 330 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ARIH2O95376 493 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 NDUFA8P51970 172 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 MAP3K7CLP57077 242 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 TFDP2Q14188 446 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 TAPT1Q6NXT6 567 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 VSTM1Q6UX27 236 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 KDM7AQ6ZMT4 941 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 SH3RF1Q7Z6J0 888 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 SYTL1Q8IYJ3 562 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 TIGD1Q96MW7 591 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 GPR63Q9BZJ6 419 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 CAPN10Q9HC96 672 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 INTS13Q9NVM9 706 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 MARCH2Q9P0N8 246 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 SENP1Q9P0U3 644 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ANKRD26Q9UPS8 1709 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 LRRD1A4D1F6 860 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 MTA2O94776 668 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 SUN1O94901 812 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ATP11AP98196 1134 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 PDGFRLQ15198 375 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 C8orf34Q49A92 452 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 HGSNATQ68CP4 663 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 SPATA24Q86W54 205 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 BRSK2Q8IWQ3 736 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 OR10Q1Q8NGQ4 319 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 MORC4Q8TE76 937 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 C17orf80Q9BSJ5 609 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 NLNQ9BYT8 704 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 DHX35Q9H5Z1 703 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 TMEM8AQ9HCN3 771 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 AGPAT5Q9NUQ2 364 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 COL20A1Q9P218 1284 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 DNMT3LQ9UJW3 386 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 MAD1L1Q9Y6D9 718 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 RGPD5Q99666 1765 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 PIK3R2O00459 728 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 PXNP49023 591 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 GAD2Q05329 585 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms