RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 KCNA4P22459 653 aa30.02■■■□□ 2.4
CBX4-202ENST00000448310 MESP2Q0VG99 397 aa30.02■■■□□ 2.4
CBX4-202ENST00000448310 ACOT1Q86TX2 421 aa30.02■■■□□ 2.4
CBX4-202ENST00000448310 SLC9A9Q8IVB4 645 aa30.02■■■□□ 2.4
CBX4-202ENST00000448310 CCDC33Q8N5R6 958 aa30.02■■■□□ 2.4
CBX4-202ENST00000448310 TPSD1Q9BZJ3 242 aa30.02■■■□□ 2.4
CBX4-202ENST00000448310 EBF1Q9UH73 591 aa30.02■■■□□ 2.4
CBX4-202ENST00000448310 NUP205Q92621 2012 aa30.01■■■□□ 2.4
CBX4-202ENST00000448310 THADAQ6YHU6 1953 aa30.01■■■□□ 2.4
CBX4-202ENST00000448310 SLC9A3R1O14745 358 aaPredicted RBP30.01■■■□□ 2.39
CBX4-202ENST00000448310 COCHO43405 550 aa30.01■■■□□ 2.39
CBX4-202ENST00000448310 NR3C1P04150 777 aa30.01■■■□□ 2.39
CBX4-202ENST00000448310 MPLP40238 635 aa30.01■■■□□ 2.39
CBX4-202ENST00000448310 SLC5A3P53794 718 aa30.01■■■□□ 2.39
CBX4-202ENST00000448310 PLA2G2CQ5R387 149 aa30.01■■■□□ 2.39
CBX4-202ENST00000448310 RHBDF2Q6PJF5 856 aa30.01■■■□□ 2.39
CBX4-202ENST00000448310 C12orf40Q86WS4 652 aa30.01■■■□□ 2.39
CBX4-202ENST00000448310 FUKQ8N0W3 1084 aa30.01■■■□□ 2.39
CBX4-202ENST00000448310 PDZD8Q8NEN9 1154 aa30.01■■■□□ 2.39
CBX4-202ENST00000448310 TNIP3Q96KP6 325 aa30.01■■■□□ 2.39
CBX4-202ENST00000448310 DMAP1Q9NPF5 467 aaPredicted RBP30.01■■■□□ 2.39
CBX4-202ENST00000448310 KRT82Q9NSB4 513 aa30.01■■■□□ 2.39
CBX4-202ENST00000448310 HMGXB4Q9UGU5 601 aa30.01■■■□□ 2.39
CBX4-202ENST00000448310 TNFRSF10BO14763 440 aa30■■■□□ 2.39
CBX4-202ENST00000448310 AP1G2O75843 785 aa30■■■□□ 2.39
CBX4-202ENST00000448310 ADRB1P08588 477 aa30■■■□□ 2.39
CBX4-202ENST00000448310 CCDC130P13994 396 aa30■■■□□ 2.39
CBX4-202ENST00000448310 KIAA1958Q8N8K9 716 aa30■■■□□ 2.39
CBX4-202ENST00000448310 CCDC26Q8TAB7 109 aa30■■■□□ 2.39
CBX4-202ENST00000448310 SMARCD1Q96GM5 515 aa30■■■□□ 2.39
CBX4-202ENST00000448310 ZFRQ96KR1 1074 aaKnown RBP30■■■□□ 2.39
CBX4-202ENST00000448310 CCSER2Q9H7U1 834 aa30■■■□□ 2.39
CBX4-202ENST00000448310 GMIPQ9P107 970 aa30■■■□□ 2.39
CBX4-202ENST00000448310 PCDHGA5Q9Y5G8 931 aa30■■■□□ 2.39
CBX4-202ENST00000448310 MYO18AQ92614 2054 aaKnown RBP30■■■□□ 2.39
CBX4-202ENST00000448310 ACACBO00763 2458 aa30■■■□□ 2.39
CBX4-202ENST00000448310 GBP1P32455 592 aa29.99■■■□□ 2.39
CBX4-202ENST00000448310 ELF2Q15723 593 aa29.99■■■□□ 2.39
CBX4-202ENST00000448310 ZACNQ401N2 412 aa29.99■■■□□ 2.39
CBX4-202ENST00000448310 CEP135Q66GS9 1140 aa29.99■■■□□ 2.39
CBX4-202ENST00000448310 IL31Q6EBC2 164 aa29.99■■■□□ 2.39
CBX4-202ENST00000448310 TCEAL6Q6IPX3 200 aa29.99■■■□□ 2.39
CBX4-202ENST00000448310 SPOPLQ6IQ16 392 aa29.99■■■□□ 2.39
CBX4-202ENST00000448310 ANO7Q6IWH7 933 aa29.99■■■□□ 2.39
CBX4-202ENST00000448310 DDX42Q86XP3 938 aaKnown RBP eCLIP29.99■■■□□ 2.391e-6■■■■□ 20.6
CBX4-202ENST00000448310 OVCA2Q8WZ82 227 aa29.99■■■□□ 2.39
CBX4-202ENST00000448310 TCEAL3Q969E4 200 aa29.99■■■□□ 2.39
CBX4-202ENST00000448310 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.99■■■□□ 2.391e-8■■■■■ 241.7
CBX4-202ENST00000448310 PDXKO00764 312 aa29.98■■■□□ 2.39
CBX4-202ENST00000448310 BEST1O76090 585 aa29.98■■■□□ 2.39
CBX4-202ENST00000448310 NDST1P52848 882 aa29.98■■■□□ 2.39
CBX4-202ENST00000448310 KDSRQ06136 332 aa29.98■■■□□ 2.39
CBX4-202ENST00000448310 SGSM1Q2NKQ1 1148 aa29.98■■■□□ 2.39
CBX4-202ENST00000448310 HECTD3Q5T447 861 aa29.98■■■□□ 2.39
CBX4-202ENST00000448310 SV2AQ7L0J3 742 aa29.98■■■□□ 2.39
CBX4-202ENST00000448310 TTC30AQ86WT1 665 aa29.98■■■□□ 2.39
CBX4-202ENST00000448310 ZMIZ2Q8NF64 920 aa29.98■■■□□ 2.39
CBX4-202ENST00000448310 PNKPQ96T60 521 aa29.98■■■□□ 2.39
CBX4-202ENST00000448310 SMOQ99835 787 aa29.98■■■□□ 2.39
CBX4-202ENST00000448310 IL37Q9NZH6 218 aa29.98■■■□□ 2.39
CBX4-202ENST00000448310 MMP17Q9ULZ9 603 aa29.98■■■□□ 2.39
CBX4-202ENST00000448310 ADH1CP00326 375 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 ADH5P11766 374 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 HNRNPLP14866 589 aaKnown RBP eCLIP29.97■■■□□ 2.39
CBX4-202ENST00000448310 CMA1P23946 247 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 LIMK1P53667 647 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 CREB5Q02930 508 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 LY6G5CQ5SRR4 150 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 C1orf220Q5T0J3 134 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 ALLCQ8N6M5 410 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 SLC2A14Q8TDB8 520 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 TMEM174Q8WUU8 243 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 WBP2Q969T9 261 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 ZDHHC4Q9NPG8 344 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 VPS45Q9NRW7 570 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 FAM49BQ9NUQ9 324 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 HPSEQ9Y251 543 aa29.97■■■□□ 2.39
CBX4-202ENST00000448310 E2F8A0AVK6 867 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 RHOBTB1O94844 696 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 KAT7O95251 611 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 RPN1P04843 607 aaKnown RBP29.96■■■□□ 2.39
CBX4-202ENST00000448310 PRR29P0C7W0 189 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 P4HA1P13674 534 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 TIE1P35590 1138 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 PGFP49763 221 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 EMC10Q5UCC4 262 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 TMEM92Q6UXU6 159 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 RASSF3Q86WH2 238 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 C12orf29Q8N999 325 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 TMC2Q8TDI7 906 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 SPATA32Q96LK8 384 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 TBC1D14Q9P2M4 693 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 USP25Q9UHP3 1055 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 SH3BP1Q9Y3L3 701 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 EPG5Q9HCE0 2579 aa29.96■■■□□ 2.39
CBX4-202ENST00000448310 HLA-DRAP01903 254 aa29.95■■■□□ 2.39
CBX4-202ENST00000448310 APODP05090 189 aa29.95■■■□□ 2.39
CBX4-202ENST00000448310 IRF1P10914 325 aa29.95■■■□□ 2.39
CBX4-202ENST00000448310 CHRM1P11229 460 aaPredicted RBP29.95■■■□□ 2.39
CBX4-202ENST00000448310 PIK3CAP42336 1068 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms