RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 RBM15Q96T37 977 aaKnown RBP eCLIP20.41■□□□□ 0.864e-9■■■■□ 21.7
FAM3A-215ENST00000447601 B3GNT5Q9BYG0 378 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 ETS1P14921 441 aa20.4■□□□□ 0.86
FAM3A-215ENST00000447601 MLH1P40692 756 aa20.4■□□□□ 0.86
FAM3A-215ENST00000447601 EIF3EP60228 445 aaKnown RBP20.4■□□□□ 0.86
FAM3A-215ENST00000447601 DPYSL3Q14195 570 aa20.4■□□□□ 0.86
FAM3A-215ENST00000447601 KYNUQ16719 465 aa20.4■□□□□ 0.86
FAM3A-215ENST00000447601 SCYL2Q6P3W7 929 aa20.4■□□□□ 0.86
FAM3A-215ENST00000447601 PAXIP1Q6ZW49 1069 aaPredicted RBP20.4■□□□□ 0.86
FAM3A-215ENST00000447601 SERPINB12Q96P63 405 aa20.4■□□□□ 0.86
FAM3A-215ENST00000447601 HNRNPABQ99729 332 aaKnown RBP20.4■□□□□ 0.86
FAM3A-215ENST00000447601 TSPYL2Q9H2G4 693 aaPredicted RBP20.4■□□□□ 0.86
FAM3A-215ENST00000447601 XPO1O14980 1071 aaKnown RBP20.39■□□□□ 0.86
FAM3A-215ENST00000447601 MDM4O15151 490 aa20.39■□□□□ 0.86
FAM3A-215ENST00000447601 THP07101 528 aa20.39■□□□□ 0.86
FAM3A-215ENST00000447601 ASGR1P07306 291 aa20.39■□□□□ 0.86
FAM3A-215ENST00000447601 AUHQ13825 339 aaKnown RBP20.39■□□□□ 0.86
FAM3A-215ENST00000447601 RNASEH2BQ5TBB1 312 aaKnown RBP20.39■□□□□ 0.86
FAM3A-215ENST00000447601 OSTM1Q86WC4 334 aa20.39■□□□□ 0.86
FAM3A-215ENST00000447601 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.39■□□□□ 0.86
FAM3A-215ENST00000447601 PWWP2AQ96N64 755 aa20.39■□□□□ 0.86
FAM3A-215ENST00000447601 EPN3Q9H201 632 aa20.39■□□□□ 0.86
FAM3A-215ENST00000447601 GIT1Q9Y2X7 761 aa20.39■□□□□ 0.86
FAM3A-215ENST00000447601 TCEA3O75764 348 aa20.39■□□□□ 0.85
FAM3A-215ENST00000447601 LCP1P13796 627 aa20.39■□□□□ 0.85
FAM3A-215ENST00000447601 PECAM1P16284 738 aaPredicted RBP20.39■□□□□ 0.85
FAM3A-215ENST00000447601 SLCO1A2P46721 670 aa20.39■□□□□ 0.85
FAM3A-215ENST00000447601 TRIM32Q13049 653 aa20.39■□□□□ 0.85
FAM3A-215ENST00000447601 PTGISQ16647 500 aa20.39■□□□□ 0.85
FAM3A-215ENST00000447601 RAB6CQ53S08 254 aa20.39■□□□□ 0.85
FAM3A-215ENST00000447601 TNFAIP8L3Q5GJ75 292 aa20.39■□□□□ 0.85
FAM3A-215ENST00000447601 SPATA18Q8TC71 538 aa20.39■□□□□ 0.85
FAM3A-215ENST00000447601 TTC25Q96NG3 672 aa20.39■□□□□ 0.85
FAM3A-215ENST00000447601 RNF157Q96PX1 679 aa20.39■□□□□ 0.85
FAM3A-215ENST00000447601 RAB6CQ9H0N0 254 aa20.39■□□□□ 0.85
FAM3A-215ENST00000447601 TMEM88BA6NKF7 163 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 ZNF487B1APH4 448 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 GABRDO14764 452 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 ABHD2P08910 425 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 ATP5DP30049 168 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 MAGEA4P43358 317 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 MMRN1Q13201 1228 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 NOMO1Q15155 1222 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 KCNA10Q16322 511 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 GSTCDQ8NEC7 633 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 KLHDC9Q8NEP7 349 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 P3H4Q92791 437 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 GAD1Q99259 594 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 CCDC77Q9BR77 488 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 SCN10AQ9Y5Y9 1956 aa20.38■□□□□ 0.85
FAM3A-215ENST00000447601 PDCD11Q14690 1871 aaKnown RBP20.38■□□□□ 0.85
FAM3A-215ENST00000447601 MEIS3P2A8K0S8 358 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 RBP3P10745 1247 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 PTPN1P18031 435 aaKnown RBP20.37■□□□□ 0.85
FAM3A-215ENST00000447601 CST5P28325 142 aaPredicted RBP20.37■□□□□ 0.85
FAM3A-215ENST00000447601 TKTP29401 623 aaKnown RBP20.37■□□□□ 0.85
FAM3A-215ENST00000447601 THPOP40225 353 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 RAB27AP51159 221 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 HDAC4P56524 1084 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 ROR1Q01973 937 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 EFHC1Q5JVL4 640 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 WSCD1Q658N2 575 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 TAOK1Q7L7X3 1001 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 PPIL6Q8IXY8 311 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 TMEM86AQ8N2M4 240 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 CLEC4CQ8WTT0 213 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 CENPIQ92674 756 aaPredicted RBP20.37■□□□□ 0.85
FAM3A-215ENST00000447601 ZNF670Q9BS34 389 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 C11orf84Q9BUA3 381 aaPredicted RBP20.37■□□□□ 0.85
FAM3A-215ENST00000447601 SNRNP25Q9BV90 132 aaKnown RBP20.37■□□□□ 0.85
FAM3A-215ENST00000447601 DUSP16Q9BY84 665 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 PCDH18Q9HCL0 1135 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 SAYSD1Q9NPB0 183 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 SMAPO00193 183 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 TGM2P21980 687 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 STIP1P31948 543 aaKnown RBP20.37■□□□□ 0.85
FAM3A-215ENST00000447601 MMP13P45452 471 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 CTCFP49711 727 aaPredicted RBP20.37■□□□□ 0.85
FAM3A-215ENST00000447601 GDF10P55107 478 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 STAT4Q14765 748 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 LONRF1Q17RB8 773 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 CENPUQ71F23 418 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 MRPL10Q7Z7H8 261 aaKnown RBP20.37■□□□□ 0.85
FAM3A-215ENST00000447601 FUKQ8N0W3 1084 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 SENP8Q96LD8 212 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 PHACTR1Q9C0D0 580 aa20.37■□□□□ 0.85
FAM3A-215ENST00000447601 FARP1Q9Y4F1 1045 aaPredicted RBP20.37■□□□□ 0.85
FAM3A-215ENST00000447601 TRIP11Q15643 1979 aa20.36■□□□□ 0.85
FAM3A-215ENST00000447601 TRIP12Q14669 1992 aaPredicted RBP20.36■□□□□ 0.85
FAM3A-215ENST00000447601 ARL5CA6NH57 179 aa20.36■□□□□ 0.85
FAM3A-215ENST00000447601 NDUFAB1O14561 156 aa20.36■□□□□ 0.85
FAM3A-215ENST00000447601 APOL1O14791 398 aa20.36■□□□□ 0.85
FAM3A-215ENST00000447601 MYCNP04198 464 aaPredicted RBP20.36■□□□□ 0.85
FAM3A-215ENST00000447601 PRKAR2AP13861 404 aaKnown RBP20.36■□□□□ 0.85
FAM3A-215ENST00000447601 NPR3P17342 541 aa20.36■□□□□ 0.85
FAM3A-215ENST00000447601 CCND3P30281 292 aaPredicted RBP20.36■□□□□ 0.85
FAM3A-215ENST00000447601 RPL9P32969 192 aaKnown RBP20.36■□□□□ 0.85
FAM3A-215ENST00000447601 LHX1P48742 406 aa20.36■□□□□ 0.85
FAM3A-215ENST00000447601 IFI35P80217 286 aaPredicted RBP20.36■□□□□ 0.85
FAM3A-215ENST00000447601 ZC3H12AQ5D1E8 599 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms