RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 MRPS35P82673 323 aaKnown RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 DRAP1Q14919 205 aaPredicted RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 SHHQ15465 462 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 SKIV2LQ15477 1246 aaKnown RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 ZFYVE27Q5T4F4 411 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 PPP2R2DQ66LE6 453 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 GJB7Q6PEY0 223 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 RFX8Q6ZV50 586 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 MRPL10Q7Z7H8 261 aaKnown RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 HOOK3Q86VS8 718 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 SCN4BQ8IWT1 228 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 RNF168Q8IYW5 571 aaPredicted RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 GALNT15Q8N3T1 639 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 TTC39CQ8N584 583 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 DTX3LQ8TDB6 740 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 ARNTL2Q8WYA1 636 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 TOP1MTQ969P6 601 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 DDX50Q9BQ39 737 aaKnown RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 PHACTR1Q9C0D0 580 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 MIOSQ9NXC5 875 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 GALNT8Q9NY28 637 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 CXXC1Q9P0U4 656 aaPredicted RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 GGA2Q9UJY4 613 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 POLIQ9UNA4 740 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 CARNS1A5YM72 827 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 GRXCR1A8MXD5 290 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 TCP11X1B4DZS4 312 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 HNRNPCP07910 306 aaKnown RBP eCLIP6.22□□□□□ -1.41
PROM1-201ENST00000447510 PON1P27169 355 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 PCSK1P29120 753 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 RAP1GAPP47736 663 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 PLTPP55058 493 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 NCALDP61601 193 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 MTMR3Q13615 1198 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 BYSLQ13895 437 aaKnown RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 CTXN3Q4LDR2 81 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 LACTB2Q53H82 288 aaPredicted RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 DENND2CQ68D51 928 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 OVOS1Q6IE37 1185 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 KCNT2Q6UVM3 1135 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 ENOSF1Q7L5Y1 443 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 ZNF280BQ86YH2 543 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 ADGRF2Q8IZF7 708 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 C1orf127Q8N9H9 656 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 DNAJC9Q8WXX5 260 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 TNIP3Q96KP6 325 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 ZMAT2Q96NC0 199 aaKnown RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 TLR10Q9BXR5 811 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 ZNF232Q9UNY5 417 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 CHMP2BQ9UQN3 213 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 SF3B1O75533 1304 aaKnown RBP eCLIP6.22□□□□□ -1.41
PROM1-201ENST00000447510 H7C4K7 107 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 NRP1O14786 923 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 ZNF263O14978 683 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 GJB5O95377 273 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 CST3P01034 146 aaPredicted RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 KCNE1P15382 129 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 DESP17661 470 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 CYP3A5P20815 502 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 CDH8P55286 799 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 COPS2P61201 443 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 POU5F1Q01860 360 aaKnown RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 YWHAHQ04917 246 aaPredicted RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 ORC1Q13415 861 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 CUL2Q13617 745 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 LLGL1Q15334 1064 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 RAB30Q15771 203 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 CLLU1OSQ5K130 101 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 ANO7Q6IWH7 933 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 TMEM237Q96Q45 408 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 DNAJC7Q99615 494 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 DNAAF2Q9NVR5 837 aaKnown RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 ADAM22Q9P0K1 906 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 CNTN3Q9P232 1028 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 SLC12A6Q9UHW9 1150 aa6.22□□□□□ -1.41
PROM1-201ENST00000447510 BZW2Q9Y6E2 419 aaKnown RBP6.22□□□□□ -1.41
PROM1-201ENST00000447510 LRRC53A6NM62 1247 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 TMEM110-MUSTN1A8MSY1 372 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 UCHL3P15374 230 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 IGFBP4P22692 258 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 ADORA2BP29275 332 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 DYNC1I2Q13409 638 aaKnown RBP6.21□□□□□ -1.41
PROM1-201ENST00000447510 C9orf50Q5SZB4 431 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 WSCD1Q658N2 575 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 ZNF280DQ6N043 979 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 UCMAQ8WVF2 138 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 LINC01599Q8WXQ3 324 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 TRIM51Q9BSJ1 452 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 NT5C1AQ9BXI3 368 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 FAM129AQ9BZQ8 928 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 NRDE2Q9H7Z3 1164 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 PREBQ9HCU5 417 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 PLCB1Q9NQ66 1216 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 CEP72Q9P209 647 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 KLHL14Q9P2G3 628 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 DNAJB4Q9UDY4 337 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 ADAM28Q9UKQ2 775 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms