RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PADI3Q9ULW8 664 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 TLDC2A0PJX2 215 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 APOC4-APOC2K7ER74 178 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 KIF3CO14782 793 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 MGEA5O60502 916 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 IFNB1P01574 187 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 APOC2P02655 101 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 CLCNKBP51801 687 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 HDAC4P56524 1084 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 PPARDQ03181 441 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 KYNUQ16719 465 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 ZC3H12AQ5D1E8 599 aaKnown RBP18.25■□□□□ 0.51
SMC6-206ENST00000446852 KIAA0319Q5VV43 1072 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 PGM2Q96G03 612 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 C11orf84Q9BUA3 381 aaPredicted RBP18.25■□□□□ 0.51
SMC6-206ENST00000446852 SLC38A7Q9NVC3 462 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 SLC12A6Q9UHW9 1150 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 CLDN5O00501 218 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 GABRDO14764 452 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 GPR182O15218 404 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 TTC4O95801 387 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 THP07101 528 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 GHRP10912 638 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 CST5P28325 142 aaPredicted RBP18.25■□□□□ 0.51
SMC6-206ENST00000446852 SCNN1GP51170 649 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 SP3Q02447 781 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 PAQR9Q6ZVX9 377 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 ZCCHC9Q8N567 271 aaKnown RBP18.25■□□□□ 0.51
SMC6-206ENST00000446852 SENP8Q96LD8 212 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 FRMD8P1Q9BZ68 369 aaPredicted RBP18.25■□□□□ 0.51
SMC6-206ENST00000446852 CYLDQ9NQC7 956 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 NINJ2Q9NZG7 142 aa18.25■□□□□ 0.51
SMC6-206ENST00000446852 SLCO1A2P46721 670 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 NOGQ13253 232 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 CA9Q16790 459 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 FOXR1Q6PIV2 292 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 NPNTQ6UXI9 565 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 HACE1Q8IYU2 909 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 HNRNPABQ99729 332 aaKnown RBP18.24■□□□□ 0.51
SMC6-206ENST00000446852 PAAF1Q9BRP4 392 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 SNRNP25Q9BV90 132 aaKnown RBP18.24■□□□□ 0.51
SMC6-206ENST00000446852 GPBP1L1Q9HC44 474 aaPredicted RBP18.24■□□□□ 0.51
SMC6-206ENST00000446852 ZNF638Q14966 1978 aaKnown RBP18.24■□□□□ 0.51
SMC6-206ENST00000446852 BEST1O76090 585 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 PTPN1P18031 435 aaKnown RBP18.24■□□□□ 0.51
SMC6-206ENST00000446852 IL4RP24394 825 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 MDH1P40925 334 aaKnown RBP18.24■□□□□ 0.51
SMC6-206ENST00000446852 PTPN9P43378 593 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 HNRNPH2P55795 449 aaKnown RBP18.24■□□□□ 0.51
SMC6-206ENST00000446852 PPP2R2AP63151 447 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 PIGZQ86VD9 579 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 PKNOX2Q96KN3 472 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 HSFY1Q96LI6 401 aa18.24■□□□□ 0.51
SMC6-206ENST00000446852 TRMT13Q9NUP7 481 aaKnown RBP18.24■□□□□ 0.51
SMC6-206ENST00000446852 TPX2Q9ULW0 747 aaKnown RBP18.24■□□□□ 0.51
SMC6-206ENST00000446852 XPO1O14980 1071 aaKnown RBP18.23■□□□□ 0.51
SMC6-206ENST00000446852 ATXN1P54253 815 aaKnown RBP18.23■□□□□ 0.51
SMC6-206ENST00000446852 BOLA3Q53S33 107 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 RNASEH2BQ5TBB1 312 aaKnown RBP18.23■□□□□ 0.51
SMC6-206ENST00000446852 MRPL10Q7Z7H8 261 aaKnown RBP18.23■□□□□ 0.51
SMC6-206ENST00000446852 UNC45BQ8IWX7 931 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 ARFGAP2Q8N6H7 521 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 TEKT4Q8WW24 435 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 RBM15Q96T37 977 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMC6-206ENST00000446852 DUSP16Q9BY84 665 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 GIT1Q9Y2X7 761 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 RPLP2P05387 115 aaKnown RBP18.23■□□□□ 0.51
SMC6-206ENST00000446852 SCNN1AP37088 669 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 ACADSBP45954 432 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 EIF3EP60228 445 aaKnown RBP18.23■□□□□ 0.51
SMC6-206ENST00000446852 KRT81Q14533 505 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 LPIN1Q14693 890 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 RELL1Q8IUW5 271 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 SPATA18Q8TC71 538 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 NDRG1Q92597 394 aaKnown RBP18.23■□□□□ 0.51
SMC6-206ENST00000446852 CENPIQ92674 756 aaPredicted RBP18.23■□□□□ 0.51
SMC6-206ENST00000446852 RNF157Q96PX1 679 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 DNAI2Q9GZS0 605 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 RABEP2Q9H5N1 569 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 PCDH18Q9HCL0 1135 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 CRTAC1Q9NQ79 661 aa18.23■□□□□ 0.51
SMC6-206ENST00000446852 TIMM13Q9Y5L4 95 aaPredicted RBP18.23■□□□□ 0.51
SMC6-206ENST00000446852 CASTOR2A6NHX0 329 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 RASGRF2O14827 1237 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 LSP1P33241 339 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 IFI35P80217 286 aaPredicted RBP18.22■□□□□ 0.51
SMC6-206ENST00000446852 ADIGQ0VDE8 80 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 AUHQ13825 339 aaKnown RBP18.22■□□□□ 0.51
SMC6-206ENST00000446852 LONRF1Q17RB8 773 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 MDH1BQ5I0G3 518 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 C6orf118Q5T5N4 469 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 B4GALNT4Q76KP1 1039 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 ARCQ7LC44 396 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 C9orf72Q96LT7 481 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 TBCBQ99426 244 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 DDX43Q9NXZ2 648 aaKnown RBP18.22■□□□□ 0.51
SMC6-206ENST00000446852 CALCOCO1Q9P1Z2 691 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 A6NNZ2 444 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 MDM4O15151 490 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 RGS16O15492 202 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms