RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 ADGRB1O14514 1584 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 DDNO94850 711 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 ERBB2P04626 1255 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 ADH1AP07327 375 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 SERPINF2P08697 491 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 WEE2P0C1S8 567 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 AGAP3Q96P47 875 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 PANX3Q96QZ0 392 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 TRABDQ9H4I3 376 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 RPRD1BQ9NQG5 326 aaKnown RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 CYP2A7P20853 494 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 SERPINB8P50452 374 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 MAD2L1Q13257 205 aaPredicted RBP8.84□□□□□ -0.99
PTPN3-204ENST00000446349 LLGL1Q15334 1064 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 ZBTB41Q5SVQ8 909 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 ZCCHC8Q6NZY4 707 aaKnown RBP8.84□□□□□ -0.99
PTPN3-204ENST00000446349 SERPINB12Q96P63 405 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 CCDC3Q9BQI4 270 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 SYT15Q9BQS2 421 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 TMEM161AQ9NX61 479 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 FAM208AQ9UK61 1670 aaKnown RBP8.84□□□□□ -0.99
PTPN3-204ENST00000446349 COL14A1Q05707 1796 aaKnown RBP8.84□□□□□ -0.99
PTPN3-204ENST00000446349 CES1P23141 567 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 RHOAP61586 193 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 CYP24A1Q07973 514 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 SLAIN1Q8ND83 568 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 TINF2Q9BSI4 451 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 ZMYM5Q9UJ78 669 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 NPHP3-ACAD11A0A0J9YXS1 232 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 SDR42E2A6NKP2 422 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 ZMYND10O75800 440 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 ZBTB48P10074 688 aaPredicted RBP8.84□□□□□ -0.99
PTPN3-204ENST00000446349 MAP2K5Q13163 448 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 MAPK8IP2Q13387 824 aaPredicted RBP8.84□□□□□ -0.99
PTPN3-204ENST00000446349 TCEA2Q15560 299 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 CEP70Q8NHQ1 597 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 GFM2Q969S9 779 aaKnown RBP8.84□□□□□ -0.99
PTPN3-204ENST00000446349 NOP53Q9NZM5 478 aaKnown RBP8.84□□□□□ -0.99
PTPN3-204ENST00000446349 CST8O60676 142 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 CYP3A4P08684 503 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 INSRRP14616 1297 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 MAGOHP61326 146 aaKnown RBP8.84□□□□□ -0.99
PTPN3-204ENST00000446349 NECAB2Q7Z6G3 386 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 CARNMT1Q8N4J0 409 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 C1orf54Q8WWF1 131 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 STAMBPL1Q96FJ0 436 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 DNAJC7Q99615 494 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 TRIM4Q9C037 500 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 SLC39A8Q9C0K1 460 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 RBAK-RBAKDNI3L0D1 243 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 FGF10O15520 208 aaPredicted RBP8.84□□□□□ -0.99
PTPN3-204ENST00000446349 TRIM16O95361 564 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 GUCA1CO95843 209 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 MAPK9P45984 424 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 KCNK10P57789 538 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 CSTF3Q12996 717 aaKnown RBP8.84□□□□□ -0.99
PTPN3-204ENST00000446349 GIT2Q14161 759 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 ZNF268Q14587 947 aaPredicted RBP8.84□□□□□ -0.99
PTPN3-204ENST00000446349 LYPLAL1Q5VWZ2 237 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 UNC93AQ86WB7 457 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 CHMP2BQ9UQN3 213 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 MYO5BQ9ULV0 1848 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 TBX4P57082 545 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 PDE1CQ14123 709 aaPredicted RBP8.84□□□□□ -0.99
PTPN3-204ENST00000446349 HIC1Q14526 733 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 PHACTR4Q8IZ21 702 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 ABCB6Q9NP58 842 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 CRYL1Q9Y2S2 319 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 RIC1Q4ADV7 1423 aa8.84□□□□□ -0.99
PTPN3-204ENST00000446349 TBC1D4O60343 1298 aa8.84□□□□□ -1
PTPN3-204ENST00000446349 YY1P25490 414 aa8.84□□□□□ -1
PTPN3-204ENST00000446349 STX5Q13190 355 aa8.84□□□□□ -1
PTPN3-204ENST00000446349 GRM3Q14832 879 aa8.84□□□□□ -1
PTPN3-204ENST00000446349 PCSK7Q16549 785 aa8.84□□□□□ -1
PTPN3-204ENST00000446349 ACER1Q8TDN7 264 aa8.84□□□□□ -1
PTPN3-204ENST00000446349 GAS2L1Q99501 681 aaPredicted RBP8.84□□□□□ -1
PTPN3-204ENST00000446349 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.84□□□□□ -1
PTPN3-204ENST00000446349 ENOPH1Q9UHY7 261 aa8.84□□□□□ -1
PTPN3-204ENST00000446349 SUFUQ9UMX1 484 aa8.84□□□□□ -1
PTPN3-204ENST00000446349 ATRNO75882 1429 aa8.84□□□□□ -1
PTPN3-204ENST00000446349 SLC12A8A0AV02 714 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 FAM47DPA6NHR8 397 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 TM9SF1O15321 606 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 CHKAP35790 457 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 NAB1Q13506 487 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 PRAMEF18Q5VWM3 479 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 LVRNQ6Q4G3 990 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 PLPPR4Q7Z2D5 763 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 ZNF720Q7Z2F6 126 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 CYP4Z1Q86W10 505 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 FIBCD1Q8N539 461 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 MCOLN3Q8TDD5 553 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 SLC5A5Q92911 643 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 ASB2Q96Q27 587 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 ELAC2Q9BQ52 826 aaKnown RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 SPASTQ9UBP0 616 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 KNDC1Q76NI1 1749 aa8.83□□□□□ -1
PTPN3-204ENST00000446349 ZSCAN9O15535 394 aaPredicted RBP8.83□□□□□ -1
PTPN3-204ENST00000446349 PTPN11Q06124 597 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms