RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 STRIP2Q9ULQ0 834 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 GOLGA8SH3BPF8 625 aa18.3■□□□□ 0.52
SGCE-206ENST00000445866 HMGA1P17096 107 aaKnown RBP18.3■□□□□ 0.52
SGCE-206ENST00000445866 HOXA9P31269 272 aa18.3■□□□□ 0.52
SGCE-206ENST00000445866 PM20D1Q6GTS8 502 aa18.3■□□□□ 0.52
SGCE-206ENST00000445866 TMC5Q6UXY8 1006 aa18.3■□□□□ 0.52
SGCE-206ENST00000445866 CTNNBL1Q8WYA6 563 aaPredicted RBP18.3■□□□□ 0.52
SGCE-206ENST00000445866 TRIM11Q96F44 468 aa18.3■□□□□ 0.52
SGCE-206ENST00000445866 CORO1BQ9BR76 489 aa18.3■□□□□ 0.52
SGCE-206ENST00000445866 THAP2Q9H0W7 228 aa18.3■□□□□ 0.52
SGCE-206ENST00000445866 WDR35Q9P2L0 1181 aa18.3■□□□□ 0.52
SGCE-206ENST00000445866 MYO1AQ9UBC5 1043 aa18.3■□□□□ 0.52
SGCE-206ENST00000445866 SCML2Q9UQR0 700 aa18.3■□□□□ 0.52
SGCE-206ENST00000445866 ADGRG1Q9Y653 693 aa18.3■□□□□ 0.52
SGCE-206ENST00000445866 GLP2RO95838 553 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 MYBL1P10243 752 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 PTPN2P17706 415 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 RRM1P23921 792 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 MRPS5P82675 430 aaKnown RBP18.29■□□□□ 0.52
SGCE-206ENST00000445866 SLC6A3Q01959 620 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 TAF10Q12962 218 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 CCDC85BQ15834 202 aaPredicted RBP18.29■□□□□ 0.52
SGCE-206ENST00000445866 FAM183BPQ6ZVS7 135 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 KIAA1328Q86T90 577 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 ZDHHC17Q8IUH5 632 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 CLEC4CQ8WTT0 213 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 FBXO32Q969P5 355 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 ZNF653Q96CK0 615 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 TRIM44Q96DX7 344 aaPredicted RBP18.29■□□□□ 0.52
SGCE-206ENST00000445866 TTLL2Q9BWV7 592 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 PIDD1Q9HB75 910 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 MTMR10Q9NXD2 777 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 CLDND1Q9NY35 253 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 CNOT8Q9UFF9 292 aaKnown RBP18.29■□□□□ 0.52
SGCE-206ENST00000445866 REXO2Q9Y3B8 237 aaKnown RBP18.29■□□□□ 0.52
SGCE-206ENST00000445866 TRANK1O15050 2925 aa18.29■□□□□ 0.52
SGCE-206ENST00000445866 SART1O43290 800 aaKnown RBP18.28■□□□□ 0.52
SGCE-206ENST00000445866 DAOAP59103 153 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 RNASE9P60153 205 aaKnown RBP18.28■□□□□ 0.52
SGCE-206ENST00000445866 TAF5Q15542 800 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 RARS2Q5T160 578 aaKnown RBP18.28■□□□□ 0.52
SGCE-206ENST00000445866 ANKRD54Q6NXT1 300 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 MON1AQ86VX9 555 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 HS6ST3Q8IZP7 471 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 MCRS1Q96EZ8 462 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 MYRFLQ96LU7 910 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 GUCD1Q96NT3 240 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 SLITRK1Q96PX8 696 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 APOL5Q9BWW9 433 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 SFXN1Q9H9B4 322 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 PARVAQ9NVD7 372 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 INTUQ9ULD6 942 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.28■□□□□ 0.52
SGCE-206ENST00000445866 ATMINO43313 823 aaPredicted RBP18.28■□□□□ 0.52
SGCE-206ENST00000445866 ABL1P00519 1130 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 TMEM253P0C7T8 217 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 FOSL2P15408 326 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 HOXB8P17481 243 aaPredicted RBP18.28■□□□□ 0.52
SGCE-206ENST00000445866 CTC1Q2NKJ3 1217 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 EFHC1Q5JVL4 640 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 FAM102AQ5T9C2 384 aaPredicted RBP18.28■□□□□ 0.52
SGCE-206ENST00000445866 DNAJC24Q6P3W2 148 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 SCML4Q8N228 414 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 CMASQ8NFW8 434 aaPredicted RBP18.28■□□□□ 0.52
SGCE-206ENST00000445866 PPM1EQ8WY54 764 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 IRGQQ8WZA9 623 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 SMG7Q92540 1137 aaKnown RBP18.28■□□□□ 0.52
SGCE-206ENST00000445866 FAM149B1Q96BN6 582 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 ZNF707Q96C28 371 aaPredicted RBP18.28■□□□□ 0.52
SGCE-206ENST00000445866 UXTQ9UBK9 157 aaPredicted RBP18.28■□□□□ 0.52
SGCE-206ENST00000445866 TFR2Q9UP52 801 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 VWA8A3KMH1 1905 aa18.28■□□□□ 0.52
SGCE-206ENST00000445866 FAM92AA1XBS5 289 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 YJEFN3A6XGL0 299 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 E7ENQ6 273 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 GRAP2O75791 330 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 CYP1A2P05177 515 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 KRT3P12035 628 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 MAMLD1Q13495 774 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 PABPC1LQ4VXU2 614 aaKnown RBP18.27■□□□□ 0.52
SGCE-206ENST00000445866 OLFML1Q6UWY5 402 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 GRASPQ7Z6J2 395 aaPredicted RBP18.27■□□□□ 0.52
SGCE-206ENST00000445866 TXLNBQ8N3L3 684 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 GOLGA1Q92805 767 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 ARHGEF26Q96DR7 871 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 TRMT2BQ96GJ1 504 aaKnown RBP18.27■□□□□ 0.52
SGCE-206ENST00000445866 SELENOOQ9BVL4 669 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 ZNF334Q9HCZ1 680 aaPredicted RBP18.27■□□□□ 0.52
SGCE-206ENST00000445866 ASAH2Q9NR71 780 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 HCFC1R1Q9NWW0 138 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 TRPM5Q9NZQ8 1165 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 GMIPQ9P107 970 aa18.27■□□□□ 0.52
SGCE-206ENST00000445866 DNMT3BQ9UBC3 853 aaKnown RBP18.27■□□□□ 0.52
SGCE-206ENST00000445866 MYO7AQ13402 2215 aa18.27■□□□□ 0.51
SGCE-206ENST00000445866 KIAA1671Q9BY89 1806 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 A0A1W2PQH9 124 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 RCCD1A6NED2 376 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 SIGLEC16A6NMB1 481 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 CCDC175P0C221 793 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 MYL4P12829 197 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms