RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 TSPAN16Q9UKR8 245 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 HEY1Q9Y5J3 304 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 PPP2R3BQ9Y5P8 575 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 BRCA1P38398 1863 aaKnown RBP13.15□□□□□ -0.3
TRO-215ENST00000445561 A0A0G2JND7 137 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 C2CD4BA6NLJ0 364 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 LPXNO60711 386 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 C22orf31O95567 290 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 GPD1P21695 349 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 FYB2Q5VWT5 728 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 CCDC62Q6P9F0 684 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 MOB2Q70IA6 237 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 ILDR2Q71H61 639 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 EXOC8Q8IYI6 725 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 KCNV2Q8TDN2 545 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.15□□□□□ -0.3
TRO-215ENST00000445561 CFAP36Q96G28 342 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 FAM111AQ96PZ2 611 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 TBC1D10AQ9BXI6 508 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 PHACTR1Q9C0D0 580 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 SMARCAD1Q9H4L7 1026 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 PDZD7Q9H5P4 517 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 MANSC1Q9H8J5 431 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 KANSL3Q9P2N6 904 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 NKX1-2Q9UD57 310 aaPredicted RBP13.15□□□□□ -0.3
TRO-215ENST00000445561 ZFP69BQ9UJL9 534 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 AKT3Q9Y243 479 aa13.15□□□□□ -0.3
TRO-215ENST00000445561 LTBP3Q9NS15 1303 aa13.15□□□□□ -0.31
TRO-215ENST00000445561 MCM3APO60318 1980 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 KCNN4O15554 427 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 PRPSAP2O60256 369 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 HBP1O60381 514 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 HMGCRP04035 888 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 PYGBP11216 843 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 INSRRP14616 1297 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 ATP2A2P16615 1042 aaKnown RBP13.14□□□□□ -0.31
TRO-215ENST00000445561 PCK1P35558 622 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 ZNF200P98182 395 aaPredicted RBP13.14□□□□□ -0.31
TRO-215ENST00000445561 KRT81Q14533 505 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 KCNJ11Q14654 390 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 AMHR2Q16671 573 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 TTC17Q96AE7 1141 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 CNPY3Q9BT09 278 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 PRMT7Q9NVM4 692 aaPredicted RBP13.14□□□□□ -0.31
TRO-215ENST00000445561 TEX264Q9Y6I9 313 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 IKBKGQ9Y6K9 419 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 PTPRFP10586 1907 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 CENPFP49454 3210 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 C2orf71A6NGG8 1288 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 TM9SF1O15321 606 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 INHBAP08476 426 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 VDRP11473 427 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 ARF4P18085 180 aaPredicted RBP13.14□□□□□ -0.31
TRO-215ENST00000445561 LONP2Q86WA8 852 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 CCDC33Q8N5R6 958 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 FAM13CQ8NE31 585 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 CXCL16Q9H2A7 254 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 USP29Q9HBJ7 922 aa13.14□□□□□ -0.31
TRO-215ENST00000445561 NGRNQ9NPE2 291 aaKnown RBP13.14□□□□□ -0.31
TRO-215ENST00000445561 A0A0G2JMZ2 1700 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 LRRC37A2A6NM11 1700 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 C2CD2LO14523 706 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 ATP5HO75947 161 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 ENDOD1O94919 500 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 PFKMP08237 780 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 TROVE2P10155 538 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRO-215ENST00000445561 GM2AP17900 193 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 IL4RP24394 825 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 RBL1P28749 1068 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 STIP1P31948 543 aaKnown RBP13.13□□□□□ -0.31
TRO-215ENST00000445561 PHKA2P46019 1235 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 CLNS1AP54105 237 aaKnown RBP13.13□□□□□ -0.31
TRO-215ENST00000445561 KCTD2Q14681 263 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 TMEM132DQ14C87 1099 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 ACAP1Q15027 740 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 CA9Q16790 459 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 CCDC14Q49A88 953 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 CLNKQ7Z7G1 428 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 CTAGE3PQ8IX95 158 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 PLD5Q8N7P1 536 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 SLC44A1Q8WWI5 657 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 ZNF570Q96NI8 536 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 RNF157Q96PX1 679 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 MMP19Q99542 508 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 TRIM56Q9BRZ2 755 aaKnown RBP13.13□□□□□ -0.31
TRO-215ENST00000445561 RBPJLQ9UBG7 517 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 BARX2Q9UMQ3 279 aaPredicted RBP13.13□□□□□ -0.31
TRO-215ENST00000445561 IQANK1A0A1B0GTG1 560 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 CXorf49A8MYA2 514 aaPredicted RBP13.13□□□□□ -0.31
TRO-215ENST00000445561 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
TRO-215ENST00000445561 NEFHP12036 1026 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 CDC25CP30307 473 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 PARP6Q2NL67 630 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 GOLGA7BQ2TAP0 167 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 SLC45A4Q5BKX6 768 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 PMF1Q6P1K2 205 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 PRR11Q96HE9 360 aaPredicted RBP13.13□□□□□ -0.31
TRO-215ENST00000445561 RSRC1Q96IZ7 334 aaKnown RBP13.13□□□□□ -0.31
TRO-215ENST00000445561 TSSK1BQ9BXA7 367 aa13.13□□□□□ -0.31
TRO-215ENST00000445561 VPS11Q9H270 941 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms