RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 ATP8B2P98198 1209 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TFAP4Q01664 338 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 OTUD4Q01804 1114 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 CREMQ03060 361 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TAP2Q03519 686 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 EXOSC9Q06265 439 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 NIPAL4Q0D2K0 466 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 NPRL3Q12980 569 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 PLD1Q13393 1074 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 SLC12A1Q13621 1099 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 DAG1Q14118 895 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TRIM25Q14258 630 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 SNX17Q15036 470 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 POU4F3Q15319 338 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ZMYND11Q15326 602 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 SMAD2Q15796 467 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 CHRNA6Q15825 494 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ZNF124Q15973 351 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 CCDC153Q494R4 210 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ARSIQ5FYB1 569 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 BMP2KLQ5H9B9 411 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ATXN7L2Q5T6C5 722 aaPredicted RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 YOD1Q5VVQ6 348 aaPredicted RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 CDCP2Q5VXM1 449 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TBC1D9BQ66K14 1250 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ARHGAP17Q68EM7 881 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 PTRHD1Q6GMV3 140 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 NCAPH2Q6IBW4 605 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TMEM132EQ6IEE7 984 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 NFRKBQ6P4R8 1299 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 OGFOD3Q6PK18 319 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ZNF704Q6ZNC4 412 aaPredicted RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 RUFY4Q6ZNE9 571 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 LINC00696Q6ZRV3 163 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 RBM43Q6ZSC3 357 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 MAEAQ7L5Y9 396 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 HDXQ7Z353 690 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 NANOGNBQ7Z5D8 188 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 GPR142Q7Z601 462 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 FGD2Q7Z6J4 655 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TXNRD3Q86VQ6 643 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 UNC5CLQ8IV45 518 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TRMT44Q8IYL2 757 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TCAIMQ8N3R3 496 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 FBXW8Q8N3Y1 598 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 CCDC155Q8N6L0 562 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ZNF321PQ8N8H1 164 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 C2orf69Q8N8R5 385 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 BBS1Q8NFJ9 593 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 OR52M1Q8NGK5 317 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 NEDD1Q8NHV4 660 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 HUS1BQ8NHY5 278 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 DNAJA4Q8WW22 397 aaPredicted RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 SLC13A3Q8WWT9 602 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 LPIN2Q92539 896 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 SLC9A6Q92581 669 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ARHGAP45Q92619 1136 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 EZH1Q92800 747 aaPredicted RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TRIM43Q96BQ3 446 aaPredicted RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ZBTB9Q96C00 473 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ALG14Q96F25 216 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 PGAP3Q96FM1 320 aaPredicted RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TSPAN17Q96FV3 270 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 HMCESQ96FZ2 354 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 EEF2KMTQ96G04 330 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 PIWIL1Q96J94 861 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ADAD1Q96M93 576 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 CFAP57Q96MR6 1250 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 PRICKLE1Q96MT3 831 aaPredicted RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ALS2CR12Q96Q35 445 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 PRAM1Q96QH2 718 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 CDK5RAP1Q96SZ6 601 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 KCNS3Q9BQ31 491 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 USB1Q9BQ65 265 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 SELENOSQ9BQE4 189 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 DBNDD2Q9BQY9 259 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TRIM62Q9BVG3 475 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 NUP85Q9BW27 656 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 APOL6Q9BWW8 343 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 CELF4Q9BZC1 486 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ZCCHC2Q9C0B9 1178 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TTYH3Q9C0H2 523 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 ADAM19Q9H013 955 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 C12orf65Q9H3J6 166 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 NOL6Q9H6R4 1146 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 EXO5Q9H790 373 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 WDR26Q9H7D7 661 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TMEM8AQ9HCN3 771 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 OBP2BQ9NPH6 170 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 SERHLQ9NQF3 203 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 LRRC4BQ9NT99 713 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 CCM2LQ9NUG4 571 aaPredicted RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 DDX28Q9NUL7 540 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 MIS18AQ9NYP9 233 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 TMOD2Q9NZR1 351 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 MRPL15Q9P015 296 aaKnown RBP2.92□□□□□ -1.94
UBBP3-201ENST00000445497 APPL1Q9UKG1 709 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 SLC39A10Q9ULF5 831 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 DDX19BQ9UMR2 479 aa2.92□□□□□ -1.94
UBBP3-201ENST00000445497 AGAP1Q9UPQ3 857 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms