RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 CYP4V2Q6ZWL3 525 aaPredicted RBP14.3□□□□□ -0.12
RBM39-216ENST00000444878 HACE1Q8IYU2 909 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 TOP6BLQ8N6T0 577 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 SLC2A14Q8TDB8 520 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.3□□□□□ -0.12
RBM39-216ENST00000444878 KHSRPQ92945 711 aaKnown RBP eCLIP14.3□□□□□ -0.121e-9■■■□□ 15.9
RBM39-216ENST00000444878 NCAPGQ9BPX3 1015 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 FAM105AQ9NUU6 356 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 GABBR2O75899 941 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 LCP1P13796 627 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 PECAM1P16284 738 aaPredicted RBP14.3□□□□□ -0.12
RBM39-216ENST00000444878 RDXP35241 583 aaKnown RBP14.3□□□□□ -0.12
RBM39-216ENST00000444878 MAGEA4P43358 317 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 CCT5P48643 541 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 EIF3EP60228 445 aaKnown RBP14.3□□□□□ -0.12
RBM39-216ENST00000444878 DPYSL3Q14195 570 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 LIMS2Q7Z4I7 341 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 PCGF5Q86SE9 256 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 SPATA18Q8TC71 538 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 SERPINB12Q96P63 405 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 PPP1R10Q96QC0 940 aaKnown RBP14.3□□□□□ -0.12
RBM39-216ENST00000444878 C10orf88Q9H8K7 445 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 PPANQ9NQ55 473 aaKnown RBP14.3□□□□□ -0.12
RBM39-216ENST00000444878 CYLDQ9NQC7 956 aa14.3□□□□□ -0.12
RBM39-216ENST00000444878 CEP350Q5VT06 3117 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 SRRM3A6NNA2 597 aaPredicted RBP14.29□□□□□ -0.12
RBM39-216ENST00000444878 SEPT4O43236 478 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 RBP3P10745 1247 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 WARSP23381 471 aaKnown RBP14.29□□□□□ -0.12
RBM39-216ENST00000444878 ACADSBP45954 432 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 GDF10P55107 478 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 PDK2Q15119 407 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 RNASEH2BQ5TBB1 312 aaKnown RBP14.29□□□□□ -0.12
RBM39-216ENST00000444878 SLC26A9Q7LBE3 791 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 B3GALNT2Q8NCR0 500 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 TEKT4Q8WW24 435 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 P3H4Q92791 437 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 HSFY1Q96LI6 401 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 TBCBQ99426 244 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 SELENOSQ9BQE4 189 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 UPF3AQ9H1J1 476 aaKnown RBP14.29□□□□□ -0.12
RBM39-216ENST00000444878 SAYSD1Q9NPB0 183 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 SLC38A7Q9NVC3 462 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 SHOC2Q9UQ13 582 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 CASP8AP2Q9UKL3 1982 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 MEIS3P2A8K0S8 358 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 E7EVH7 732 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 CYB561D2O14569 222 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 CHRNA1P02708 482 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 MLH1P40692 756 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 MMP13P45452 471 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 SEC24CP53992 1094 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 SLC8A3P57103 927 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 TNFAIP8L3Q5GJ75 292 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 CYP4F22Q6NT55 531 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 TAOK1Q7L7X3 1001 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 SERINC5Q86VE9 423 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 OSTM1Q86WC4 334 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 CLEC4CQ8WTT0 213 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 WNT8BQ93098 351 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 CCDC77Q9BR77 488 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 TSPYL2Q9H2G4 693 aaPredicted RBP14.29□□□□□ -0.12
RBM39-216ENST00000444878 CHST12Q9NRB3 414 aa14.29□□□□□ -0.12
RBM39-216ENST00000444878 TDRD15B5MCY1 1934 aaKnown RBP14.28□□□□□ -0.12
RBM39-216ENST00000444878 EBAG9O00559 213 aa14.28□□□□□ -0.12
RBM39-216ENST00000444878 ATP5DP30049 168 aa14.28□□□□□ -0.12
RBM39-216ENST00000444878 SCNN1AP37088 669 aa14.28□□□□□ -0.12
RBM39-216ENST00000444878 ZC3H12AQ5D1E8 599 aaKnown RBP14.28□□□□□ -0.12
RBM39-216ENST00000444878 NLRP14Q86W24 1093 aa14.28□□□□□ -0.12
RBM39-216ENST00000444878 UNC45BQ8IWX7 931 aa14.28□□□□□ -0.12
RBM39-216ENST00000444878 MDM1Q8TC05 714 aa14.28□□□□□ -0.12
RBM39-216ENST00000444878 RNF157Q96PX1 679 aa14.28□□□□□ -0.12
RBM39-216ENST00000444878 GAD1Q99259 594 aa14.28□□□□□ -0.12
RBM39-216ENST00000444878 SENP6Q9GZR1 1112 aaPredicted RBP14.28□□□□□ -0.12
RBM39-216ENST00000444878 GPATCH2LQ9NWQ4 482 aa14.28□□□□□ -0.12
RBM39-216ENST00000444878 THP07101 528 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 PTPN9P43378 593 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 RPL34P49207 117 aaKnown RBP14.27□□□□□ -0.12
RBM39-216ENST00000444878 CTCFP49711 727 aaPredicted RBP14.27□□□□□ -0.12
RBM39-216ENST00000444878 HDAC4P56524 1084 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 PRKCZQ05513 592 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 TRIM32Q13049 653 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 STAT4Q14765 748 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 NOMO1Q15155 1222 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 WSCD1Q658N2 575 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 DARS2Q6PI48 645 aaKnown RBP14.27□□□□□ -0.12
RBM39-216ENST00000444878 NPNTQ6UXI9 565 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 CENPUQ71F23 418 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 ZC3H18Q86VM9 953 aaKnown RBP14.27□□□□□ -0.12
RBM39-216ENST00000444878 PPIL6Q8IXY8 311 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 FAM71DQ8N9W8 422 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 PRCCQ92733 491 aaPredicted RBP14.27□□□□□ -0.12
RBM39-216ENST00000444878 TTC25Q96NG3 672 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 CCT8L2Q96SF2 557 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 HNRNPABQ99729 332 aaKnown RBP14.27□□□□□ -0.12
RBM39-216ENST00000444878 SNRNP25Q9BV90 132 aaKnown RBP14.27□□□□□ -0.12
RBM39-216ENST00000444878 XPNPEP3Q9NQH7 507 aa14.27□□□□□ -0.12
RBM39-216ENST00000444878 GMNCA6NCL1 334 aa14.27□□□□□ -0.13
RBM39-216ENST00000444878 XPO1O14980 1071 aaKnown RBP14.27□□□□□ -0.13
RBM39-216ENST00000444878 MDM4O15151 490 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms