RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 RPS9P46781 194 aaKnown RBP11.73□□□□□ -0.53
HLA-F-221ENST00000444621 PMS1P54277 932 aaKnown RBP11.73□□□□□ -0.53
HLA-F-221ENST00000444621 STX17P56962 302 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 MAP3K7CLP57077 242 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 DMWDQ09019 674 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 MTAPQ13126 283 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 CCDC142Q17RM4 750 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 POTEHQ6S545 545 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 TMEM150AQ86TG1 271 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 TADA2BQ86TJ2 420 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 CPA6Q8N4T0 437 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 ARL14EPQ8N8R7 260 aaPredicted RBP11.73□□□□□ -0.53
HLA-F-221ENST00000444621 MLKLQ8NB16 471 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 USP13Q92995 863 aaPredicted RBP11.73□□□□□ -0.53
HLA-F-221ENST00000444621 ELMO3Q96BJ8 720 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 TMEM176AQ96HP8 235 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 NT5C1BQ96P26 610 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 CYP2S1Q96SQ9 504 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 HNRNPABQ99729 332 aaKnown RBP11.73□□□□□ -0.53
HLA-F-221ENST00000444621 IER2Q9BTL4 223 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 FAM126AQ9BYI3 521 aaPredicted RBP11.73□□□□□ -0.53
HLA-F-221ENST00000444621 SMG9Q9H0W8 520 aaKnown RBP11.73□□□□□ -0.53
HLA-F-221ENST00000444621 TLR8Q9NR97 1041 aaKnown RBP11.73□□□□□ -0.53
HLA-F-221ENST00000444621 FAM49BQ9NUQ9 324 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 DUS2Q9NX74 493 aaKnown RBP11.73□□□□□ -0.53
HLA-F-221ENST00000444621 RWDD2AQ9UIY3 292 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 ANGPTL2Q9UKU9 493 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 KIAA1257Q9ULG3 409 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 COQ4Q9Y3A0 265 aa11.73□□□□□ -0.53
HLA-F-221ENST00000444621 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.73□□□□□ -0.53
HLA-F-221ENST00000444621 ZNF840PA6NDX5 716 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 CILPO75339 1184 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 PRAMEF12O95522 483 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 CCDC130P13994 396 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
HLA-F-221ENST00000444621 FMO5P49326 533 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 GOLGA8FQ08AF8 430 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 GOLGA8DPQ0D2H9 430 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 ORC1Q13415 861 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 FZD5Q13467 585 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 RUNX3Q13761 415 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 ZNF394Q53GI3 561 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 DGKKQ5KSL6 1271 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 HECTD3Q5T447 861 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 LAIR1Q6GTX8 287 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 TTI2Q6NXR4 508 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 FAM114A1Q8IWE2 563 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 FUKQ8N0W3 1084 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 C12orf29Q8N999 325 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 CCDC26Q8TAB7 109 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 ATP2A3Q93084 1043 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 SLC35C1Q96A29 364 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 FAM81BQ96LP2 452 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 KCNK16Q96T55 309 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 NUP62CLQ9H1M0 184 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 CLSTN2Q9H4D0 955 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 LMAN1LQ9HAT1 526 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 APOBEC3GQ9HC16 384 aaKnown RBP11.72□□□□□ -0.53
HLA-F-221ENST00000444621 CISHQ9NSE2 258 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 SEMA4GQ9NTN9 838 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 HESX1Q9UBX0 185 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 NME7Q9Y5B8 376 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 FRYQ5TBA9 3013 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 PTPRDP23468 1912 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 TICRRQ7Z2Z1 1910 aa11.72□□□□□ -0.53
HLA-F-221ENST00000444621 GREB1Q4ZG55 1949 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 SPECC1L-ADORA2AF8WAN1 911 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 NRG2O14511 850 aaPredicted RBP11.71□□□□□ -0.53
HLA-F-221ENST00000444621 PMM2O15305 246 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 GDF9O60383 454 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 LRP3O75074 770 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 AFPP02771 609 aaKnown RBP11.71□□□□□ -0.53
HLA-F-221ENST00000444621 RETP07949 1114 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 MBL2P11226 248 aaPredicted RBP11.71□□□□□ -0.53
HLA-F-221ENST00000444621 TDGF1P13385 188 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 PRKCSHP14314 528 aaPredicted RBP11.71□□□□□ -0.53
HLA-F-221ENST00000444621 HOXB3P14651 431 aaPredicted RBP11.71□□□□□ -0.53
HLA-F-221ENST00000444621 PSEN1P49768 467 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 SLC5A3P53794 718 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 USP46P62068 366 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 GRSF1Q12849 480 aaKnown RBP eCLIP11.71□□□□□ -0.53
HLA-F-221ENST00000444621 CUL2Q13617 745 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 MTF1Q14872 753 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 CBWD6Q4V339 395 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 SGO2Q562F6 1265 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 CBWD3Q5JTY5 395 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 CBWD5Q5RIA9 395 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 PRR23CQ6ZRP0 262 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 PRR23BQ6ZRT6 265 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 SYNPOQ8N3V7 929 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 KIAA1958Q8N8K9 716 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 TTC8Q8TAM2 541 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 SH3RF2Q8TEC5 729 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 OSCP1Q8WVF1 389 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 SEMA4DQ92854 862 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 TATDN2Q93075 761 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 RSPRY1Q96DX4 576 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 ZFYVE19Q96K21 471 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 IPO9Q96P70 1041 aaKnown RBP11.71□□□□□ -0.53
HLA-F-221ENST00000444621 DUSP9Q99956 384 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms