RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 MTF1Q14872 753 aa23.06■■□□□ 1.28
TRAF4-205ENST00000444415 PKDCCQ504Y2 493 aa23.06■■□□□ 1.28
TRAF4-205ENST00000444415 DPY19L2P1Q6NXN4 242 aa23.06■■□□□ 1.28
TRAF4-205ENST00000444415 TRIM65Q6PJ69 517 aa23.06■■□□□ 1.28
TRAF4-205ENST00000444415 CREBRFQ8IUR6 639 aa23.06■■□□□ 1.28
TRAF4-205ENST00000444415 PDZD8Q8NEN9 1154 aa23.06■■□□□ 1.28
TRAF4-205ENST00000444415 CCSER2Q9H7U1 834 aa23.06■■□□□ 1.28
TRAF4-205ENST00000444415 NMUR1Q9HB89 426 aa23.06■■□□□ 1.28
TRAF4-205ENST00000444415 TSPAN16Q9UKR8 245 aa23.06■■□□□ 1.28
TRAF4-205ENST00000444415 SIT1Q9Y3P8 196 aa23.06■■□□□ 1.28
TRAF4-205ENST00000444415 USP3Q9Y6I4 520 aa23.06■■□□□ 1.28
TRAF4-205ENST00000444415 MYOFQ9NZM1 2061 aa23.06■■□□□ 1.28
TRAF4-205ENST00000444415 COCHO43405 550 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 GALR2O43603 387 aaPredicted RBP23.05■■□□□ 1.28
TRAF4-205ENST00000444415 ABL1P00519 1130 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 ARSAP15289 507 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 TRIM21P19474 475 aaKnown RBP23.05■■□□□ 1.28
TRAF4-205ENST00000444415 MTIF2P46199 727 aaKnown RBP23.05■■□□□ 1.28
TRAF4-205ENST00000444415 GOLGA7BQ2TAP0 167 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 CT47A1Q5JQC4 288 aaPredicted RBP23.05■■□□□ 1.28
TRAF4-205ENST00000444415 ANKRD52Q8NB46 1076 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 EBF3Q9H4W6 596 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 SIX2Q9NPC8 291 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 AJAP1Q9UKB5 411 aaPredicted RBP23.05■■□□□ 1.28
TRAF4-205ENST00000444415 CNTN6Q9UQ52 1028 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 SCML2Q9UQR0 700 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 PCDHB4Q9Y5E5 795 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 CPQQ9Y646 472 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 LEFTY2O00292 366 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 YWHAEP62258 255 aaKnown RBP23.05■■□□□ 1.28
TRAF4-205ENST00000444415 PLCB2Q00722 1185 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 UBXN2BQ14CS0 331 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 MAN2A1Q16706 1144 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 TPD52L1Q16890 204 aaPredicted RBP23.05■■□□□ 1.28
TRAF4-205ENST00000444415 RAB41Q5JT25 222 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 CCDC183Q5T5S1 534 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 PIGZQ86VD9 579 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 FBXO44Q9H4M3 255 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 SMPD4Q9NXE4 827 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 NFE2L3Q9Y4A8 694 aa23.05■■□□□ 1.28
TRAF4-205ENST00000444415 GTPBP10A4D1E9 387 aaKnown RBP23.04■■□□□ 1.28
TRAF4-205ENST00000444415 FAM170BA6NMN3 283 aa23.04■■□□□ 1.28
TRAF4-205ENST00000444415 PAEPP09466 180 aa23.04■■□□□ 1.28
TRAF4-205ENST00000444415 VDRP11473 427 aa23.04■■□□□ 1.28
TRAF4-205ENST00000444415 CTHP32929 405 aa23.04■■□□□ 1.28
TRAF4-205ENST00000444415 TUBP50607 506 aa23.04■■□□□ 1.28
TRAF4-205ENST00000444415 MLLT6P55198 1093 aaPredicted RBP23.04■■□□□ 1.28
TRAF4-205ENST00000444415 PDE4CQ08493 712 aa23.04■■□□□ 1.28
TRAF4-205ENST00000444415 SGO2Q562F6 1265 aa23.04■■□□□ 1.28
TRAF4-205ENST00000444415 ZNF852Q6ZMS4 543 aa23.04■■□□□ 1.28
TRAF4-205ENST00000444415 SCD5Q86SK9 330 aa23.04■■□□□ 1.28
TRAF4-205ENST00000444415 DTWD2Q8NBA8 298 aa23.04■■□□□ 1.28
TRAF4-205ENST00000444415 RBBP8NLQ8NC74 664 aaPredicted RBP23.04■■□□□ 1.28
TRAF4-205ENST00000444415 ENOX1Q8TC92 643 aaKnown RBP23.04■■□□□ 1.28
TRAF4-205ENST00000444415 WBP2Q969T9 261 aa23.04■■□□□ 1.28
TRAF4-205ENST00000444415 OSBPL6Q9BZF3 934 aa23.04■■□□□ 1.28
TRAF4-205ENST00000444415 WNT6Q9Y6F9 365 aa23.04■■□□□ 1.28
TRAF4-205ENST00000444415 SPECC1L-ADORA2AF8WAN1 911 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 GABBR2O75899 941 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 CD19P15391 556 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 RFX1P22670 979 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 PON1P27169 355 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 NUBP1P53384 320 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 EML3Q32P44 896 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 CDKAL1Q5VV42 579 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 BHLHA9Q7RTU4 235 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 CCDC186Q7Z3E2 898 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 CSGALNACT1Q8TDX6 532 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 OSCP1Q8WVF1 389 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 CLDN23Q96B33 292 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 TUBGCP2Q9BSJ2 902 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 LINC00597Q9H2U6 94 aa23.03■■□□□ 1.28
TRAF4-205ENST00000444415 THG1LQ9NWX6 298 aaKnown RBP23.03■■□□□ 1.28
TRAF4-205ENST00000444415 BECN2A8MW95 431 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 KCNJ18B7U540 433 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 SCAMP3O14828 347 aaKnown RBP23.02■■□□□ 1.28
TRAF4-205ENST00000444415 TBX18O95935 607 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 BRD2P25440 801 aaKnown RBP23.02■■□□□ 1.28
TRAF4-205ENST00000444415 PDE6CP51160 858 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 RUNX3Q13761 415 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 KCNJ12Q14500 433 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 EXOC3L4Q17RC7 722 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 HECTD3Q5T447 861 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 NAIF1Q69YI7 327 aaPredicted RBP23.02■■□□□ 1.28
TRAF4-205ENST00000444415 GBP6Q6ZN66 633 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 TTC16Q8NEE8 873 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 UBA3Q8TBC4 463 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 FAM3CQ92520 227 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 UBXN6Q9BZV1 441 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 NDST4Q9H3R1 872 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 UBE2TQ9NPD8 197 aaPredicted RBP23.02■■□□□ 1.28
TRAF4-205ENST00000444415 ACP6Q9NPH0 428 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 CYLDQ9NQC7 956 aa23.02■■□□□ 1.28
TRAF4-205ENST00000444415 NDRG2Q9UN36 371 aaKnown RBP23.02■■□□□ 1.28
TRAF4-205ENST00000444415 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.02■■□□□ 1.28
TRAF4-205ENST00000444415 A0A1W2PQH9 124 aa23.01■■□□□ 1.27
TRAF4-205ENST00000444415 TLR5O60602 858 aa23.01■■□□□ 1.27
TRAF4-205ENST00000444415 MBL2P11226 248 aaPredicted RBP23.01■■□□□ 1.27
TRAF4-205ENST00000444415 BCAT1P54687 386 aa23.01■■□□□ 1.27
TRAF4-205ENST00000444415 NHLH1Q02575 133 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms