RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 ARL14EPQ8N8R7 260 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-212ENST00000443561 DDX1Q92499 740 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-212ENST00000443561 SECISBP2LQ93073 1101 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-212ENST00000443561 FBXO32Q969P5 355 aa13.56□□□□□ -0.24
PDLIM2-212ENST00000443561 CHFRQ96EP1 664 aa13.56□□□□□ -0.24
PDLIM2-212ENST00000443561 CCSER2Q9H7U1 834 aa13.56□□□□□ -0.24
PDLIM2-212ENST00000443561 FAM207AQ9NSI2 230 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-212ENST00000443561 UXTQ9UBK9 157 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-212ENST00000443561 CHORDC1Q9UHD1 332 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-212ENST00000443561 SCML2Q9UQR0 700 aa13.56□□□□□ -0.24
PDLIM2-212ENST00000443561 A0A1W2PQH9 124 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 SMTNL1A8MU46 457 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 M0QYV0 167 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 COCHO43405 550 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 RTN3O95197 1032 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 SRFP11831 508 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 RGS7P49802 495 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 ZNF445P59923 1031 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 FCHO2Q0JRZ9 810 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 ZNF77Q15935 545 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 HFE2Q6ZVN8 426 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 CCDC186Q7Z3E2 898 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 CLEC4CQ8WTT0 213 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 ZNF606Q8WXB4 792 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 OVCA2Q8WZ82 227 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 MRPS31Q92665 395 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 NXPE3Q969Y0 559 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 ZFYVE19Q96K21 471 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 ULBP1Q9BZM6 244 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 UBXN6Q9BZV1 441 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 TTYH3Q9C0H2 523 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 NAT10Q9H0A0 1025 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 SLITRK6Q9H5Y7 841 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 TRPC7Q9HCX4 862 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 SLC2A4RGQ9NR83 387 aa13.55□□□□□ -0.24
PDLIM2-212ENST00000443561 AP5Z1O43299 807 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 GREM1O60565 184 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 TBX18O95935 607 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 GNA15P30679 374 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 FANCCQ00597 558 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 UBXN1Q04323 297 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 SIGLEC14Q08ET2 396 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 ADIGQ0VDE8 80 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 RAPGEF1Q13905 1077 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 TAF12Q16514 161 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 ARHGAP15Q53QZ3 475 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 CWF19L1Q69YN2 538 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 PM20D1Q6GTS8 502 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 TRIM67Q6ZTA4 783 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 NOP9Q86U38 636 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 MFSD6LQ8IWD5 586 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 EPS8L1Q8TE68 723 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 SLC20A1Q8WUM9 679 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 KCTD13Q8WZ19 329 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 BAP1Q92560 729 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 PIWIL1Q96J94 861 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 GCNAQ96QF7 691 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 ZFP14Q9HCL3 533 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 NLRC4Q9NPP4 1024 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 COMMD8Q9NX08 183 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 NOCTQ9UK39 431 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 NUDT5Q9UKK9 219 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 KIAA1257Q9ULG3 409 aa13.54□□□□□ -0.24
PDLIM2-212ENST00000443561 OTOL1A6NHN0 477 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 SOBPA7XYQ1 873 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 PIK3R2O00459 728 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 MDM4O15151 490 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 THAP12O43422 761 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 USP17L7P0C7H9 530 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 SETSIPP0DME0 302 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 TCF3P15923 654 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 CHRNB2P17787 502 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 DDX6P26196 483 aaKnown RBP eCLIP13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 TKTL1P51854 596 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 POLR2FP61218 127 aaKnown RBP13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 SLC7A9P82251 487 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 ZNF268Q14587 947 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 NR1I3Q14994 352 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 MEA1Q16626 185 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 GAS2L3Q86XJ1 694 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 P2RY11Q96G91 374 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 SLC4A5Q9BY07 1137 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 STK33Q9BYT3 514 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 CYLDQ9NQC7 956 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 HPS4Q9NQG7 708 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 OBP2AQ9NY56 170 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 TRPM5Q9NZQ8 1165 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 PCDHGC3Q9UN70 934 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 ARHGAP26Q9UNA1 814 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 ZDBF2Q9HCK1 2354 aa13.53□□□□□ -0.24
PDLIM2-212ENST00000443561 F5P12259 2224 aa13.52□□□□□ -0.24
PDLIM2-212ENST00000443561 FAM170AA1A519 330 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 TMEM221A6NGB7 291 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 YJEFN3A6XGL0 299 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 E7ENQ6 273 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 M0R296 226 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 SCAMP3O14828 347 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 FYNP06241 537 aa13.52□□□□□ -0.25
PDLIM2-212ENST00000443561 CYP11B1P15538 503 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms