RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 SSTR1P30872 391 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 ZNF662Q6ZS27 426 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 RPRD1AQ96P16 312 aaPredicted RBP23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 TSC22D3Q99576 134 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 NSMCE4AQ9NXX6 385 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 SLC24A2Q9UI40 661 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 MED1Q15648 1581 aaPredicted RBP23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 TCHHQ07283 1943 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 DPYSL4O14531 572 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 ANXA9O76027 345 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 PYGBP11216 843 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 CYP2F1P24903 491 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 NUMBP49757 651 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 TEDDM1Q5T9Z0 273 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 ICA1LQ8NDH6 482 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 NSL1Q96IY1 281 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 DDX50Q9BQ39 737 aaKnown RBP23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 NAT9Q9BTE0 207 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 PRRG1O14668 218 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 ADCYAP1R1P41586 468 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 BMPR2Q13873 1038 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 STRNO43815 780 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 TKTL1P51854 596 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 TMEM132BQ14DG7 1078 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 RBBP7Q16576 425 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 MUC3BQ9H195 1237 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 ABHD16BQ9H3Z7 469 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 PRDM5Q9NQX1 630 aaPredicted RBP23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 MICAL2O94851 1124 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 EIF4BP23588 611 aaKnown RBP23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 MIPP30301 263 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 ELK3P41970 407 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 ZBTB41Q5SVQ8 909 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 ZSWIM2Q8NEG5 633 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 RNF19AQ9NV58 838 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 ASTN2O75129 1339 aaPredicted RBP23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 SETSIPP0DME0 302 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 IRF1P10914 325 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 HNRNPH1P31943 449 aaKnown RBP23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 ATXN3P54252 364 aaPredicted RBP23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 SLC27A1Q6PCB7 646 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 CEP41Q9BYV8 373 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 CASTOR2A6NHX0 329 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 KRT33BQ14525 404 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 CYB5D1Q6P9G0 228 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 ELMSAN1Q6PJG2 1045 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 FOXR2Q6PJQ5 311 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 LINC00523Q86TU6 105 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 SH3TC2Q8TF17 1288 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 LATS2Q9NRM7 1088 aa23.22■■□□□ 1.31
CTDSPL-206ENST00000443503 RARS2Q5T160 578 aaKnown RBP23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 RNF180Q86T96 592 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 CMTM5Q96DZ9 223 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 NINJ2Q9NZG7 142 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 ANGPT2O15123 496 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 INPP4AQ96PE3 977 aaPredicted RBP23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 KCNK16Q96T55 309 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 ING2Q9H160 280 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 VTA1Q9NP79 307 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 HAO1Q9UJM8 370 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 SCTRP47872 440 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 FMO1Q01740 532 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 AP1ARQ63HQ0 302 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 IFNEQ86WN2 208 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 KCTD19Q17RG1 926 aaPredicted RBP23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 RIOX2Q8IUF8 465 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 CCNJLQ8IV13 435 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 SHCBP1Q8NEM2 672 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 PIDD1Q9HB75 910 aa23.21■■□□□ 1.31
CTDSPL-206ENST00000443503 PAEPP09466 180 aa23.2■■□□□ 1.31
CTDSPL-206ENST00000443503 CCND1P24385 295 aa23.2■■□□□ 1.31
CTDSPL-206ENST00000443503 TRADDQ15628 312 aa23.2■■□□□ 1.31
CTDSPL-206ENST00000443503 PPP1R2P1Q96PQ5 205 aa23.2■■□□□ 1.31
CTDSPL-206ENST00000443503 C10orf88Q9H8K7 445 aa23.2■■□□□ 1.31
CTDSPL-206ENST00000443503 LSM7Q9UK45 103 aaKnown RBP23.2■■□□□ 1.31
CTDSPL-206ENST00000443503 AURKCQ9UQB9 309 aa23.2■■□□□ 1.31
CTDSPL-206ENST00000443503 FARP1Q9Y4F1 1045 aaPredicted RBP23.2■■□□□ 1.31
CTDSPL-206ENST00000443503 E5RJQ4 531 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 ZSCAN5DPP0CG00 497 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 C6orf10Q5SRN2 563 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 OR5B17Q8NGF7 314 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 LRRC40Q9H9A6 602 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 GLRA3O75311 464 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 LGALS2P05162 132 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 ITIH4Q14624 930 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 ZACNQ401N2 412 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 EDEM1Q92611 657 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 TBCBQ99426 244 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 TMEM134Q9H6X4 195 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 DDX43Q9NXZ2 648 aaKnown RBP23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 UBP1Q9NZI7 540 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 C2CD2LO14523 706 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 UBOX5O94941 541 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 ADIGQ0VDE8 80 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 TDRD10Q5VZ19 366 aaKnown RBP23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 BHMTQ93088 406 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 MRPL1Q9BYD6 325 aaKnown RBP23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 GPRC5DQ9NZD1 345 aa23.2■■□□□ 1.3
CTDSPL-206ENST00000443503 DGKIO75912 1065 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms