RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 EXOC4Q96A65 974 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 EEF2KMTQ96G04 330 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 DUS2Q9NX74 493 aaKnown RBP9.29□□□□□ -0.92
USP6NL-203ENST00000443016 ZMIZ1Q9ULJ6 1067 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 NME7Q9Y5B8 376 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 AKAP3O75969 853 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 VNN1O95497 513 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 TRIM49P0CI25 452 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 TRIM49CP0CI26 452 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 PPP3CCP48454 512 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 GCLMP48507 274 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 TAF10Q12962 218 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 ANO6Q4KMQ2 910 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 ISM2Q6H9L7 571 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 Q6ZS52 159 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 ACOT1Q86TX2 421 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 SMYD4Q8IYR2 804 aaPredicted RBP9.29□□□□□ -0.92
USP6NL-203ENST00000443016 CPA6Q8N4T0 437 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 SH3RF2Q8TEC5 729 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 TAF4BQ92750 862 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 FUCA2Q9BTY2 467 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 B3GNT5Q9BYG0 378 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 PRMT8Q9NR22 394 aaPredicted RBP9.29□□□□□ -0.92
USP6NL-203ENST00000443016 NCDNQ9UBB6 729 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 G3BP2Q9UN86 482 aaKnown RBP9.29□□□□□ -0.92
USP6NL-203ENST00000443016 WNT6Q9Y6F9 365 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 HLA-DRAP01903 254 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 ARSAP15289 507 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 YWHAQP27348 245 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 TPM4P67936 248 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 SATB1Q01826 763 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 NR1H3Q13133 447 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 ORC1Q13415 861 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 DPCR1Q3MIW9 517 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 COBLL1Q53SF7 1204 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 TMEM164Q5U3C3 297 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 SPOPLQ6IQ16 392 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 NUP93Q8N1F7 819 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 ZBTB44Q8NCP5 570 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 OSCP1Q8WVF1 389 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 SECISBP2LQ93073 1101 aaKnown RBP9.28□□□□□ -0.92
USP6NL-203ENST00000443016 ATP2A3Q93084 1043 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 SMARCD1Q96GM5 515 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 KCNK16Q96T55 309 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 DMAP1Q9NPF5 467 aaPredicted RBP9.28□□□□□ -0.92
USP6NL-203ENST00000443016 HPS4Q9NQG7 708 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 RAB23Q9ULC3 237 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 NUP210Q8TEM1 1887 aaPredicted RBP9.28□□□□□ -0.92
USP6NL-203ENST00000443016 ZNF638Q14966 1978 aaKnown RBP9.28□□□□□ -0.92
USP6NL-203ENST00000443016 SDK1Q7Z5N4 2213 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 BICDL2A1A5D9 508 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 ZNF840PA6NDX5 716 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 OTOL1A6NHN0 477 aaPredicted RBP9.28□□□□□ -0.92
USP6NL-203ENST00000443016 CETN3O15182 167 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 MAPK13O15264 365 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 RTN3O95197 1032 aaPredicted RBP9.28□□□□□ -0.92
USP6NL-203ENST00000443016 NDST1P52848 882 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 CACNA2D1P54289 1103 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 CCINQ13939 588 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 GAS6Q14393 721 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 MAMSTRQ6ZN01 415 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 FAM35AQ86V20 835 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 KIAA2013Q8IYS2 634 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 SYNPOQ8N3V7 929 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 RIN3Q8TB24 985 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 FBXO32Q969P5 355 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 TTLL2Q9BWV7 592 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 DNAI2Q9GZS0 605 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 NACA2Q9H009 215 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 KRT82Q9NSB4 513 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 SMPD4Q9NXE4 827 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 ARHGAP26Q9UNA1 814 aa9.28□□□□□ -0.92
USP6NL-203ENST00000443016 BECN2A8MW95 431 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 AP1G2O75843 785 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 ASS1P00966 412 aaKnown RBP9.27□□□□□ -0.93
USP6NL-203ENST00000443016 CD58P19256 250 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 ZNF165P49910 485 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 PAK1Q13153 545 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 ZNF77Q15935 545 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 HEATR6Q6AI08 1181 aaKnown RBP9.27□□□□□ -0.93
USP6NL-203ENST00000443016 PRR23BQ6ZRT6 265 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 NOP9Q86U38 636 aaKnown RBP9.27□□□□□ -0.93
USP6NL-203ENST00000443016 PDZD8Q8NEN9 1154 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 SLC2A14Q8TDB8 520 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 TSG101Q99816 390 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 P2RY13Q9BPV8 354 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 BPIFA3Q9BQP9 254 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 SDCBP2Q9H190 292 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 ECT2Q9H8V3 914 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 FAM49BQ9NUQ9 324 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 GCNT4Q9P109 453 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 CHORDC1Q9UHD1 332 aaPredicted RBP9.27□□□□□ -0.93
USP6NL-203ENST00000443016 DMGDHQ9UI17 866 aaKnown RBP9.27□□□□□ -0.93
USP6NL-203ENST00000443016 SMTNL1A8MU46 457 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 GOLGA6L19H0YKK7 550 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 ATG13O75143 517 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 EPB41P11171 864 aaKnown RBP9.27□□□□□ -0.93
USP6NL-203ENST00000443016 MBL2P11226 248 aaPredicted RBP9.27□□□□□ -0.93
USP6NL-203ENST00000443016 CCDC130P13994 396 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 PFKLP17858 780 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms