RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 GLIS3Q8NEA6 775 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 FAM84AQ96KN4 292 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 FBXO44Q9H4M3 255 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 CFAP97Q9P2B7 532 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 EVLQ9UI08 416 aaPredicted RBP14.66□□□□□ -0.06
PTPRE-203ENST00000442830 LAMA1P25391 3075 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 CLIC2O15247 247 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 POLR2DO15514 142 aaKnown RBP14.65□□□□□ -0.06
PTPRE-203ENST00000442830 ZBTB24O43167 697 aaPredicted RBP14.65□□□□□ -0.06
PTPRE-203ENST00000442830 KAT7O95251 611 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 KCNK5O95279 499 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 MYL1P05976 194 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 HOXD12P35452 270 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 SEC13P55735 322 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 LMAN2Q12907 356 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 CCDC6Q16204 474 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 NAIF1Q69YI7 327 aaPredicted RBP14.65□□□□□ -0.06
PTPRE-203ENST00000442830 ANO7Q6IWH7 933 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 SHC4Q6S5L8 630 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 LPCAT2Q7L5N7 544 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 RABEPKQ7Z6M1 372 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 SLC9A9Q8IVB4 645 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 NELFCDQ8IXH7 590 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 TAF4BQ92750 862 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 HPS3Q969F9 1004 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 MED10Q9BTT4 135 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 ZNF518BQ9C0D4 1074 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 RNF38Q9H0F5 515 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 XYLT2Q9H1B5 865 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 TMEM9BQ9NQ34 198 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 ARHGEF4Q9NR80 690 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 NXF1Q9UBU9 619 aaKnown RBP14.65□□□□□ -0.06
PTPRE-203ENST00000442830 CFAP45Q9UL16 551 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 SH3BP1Q9Y3L3 701 aa14.65□□□□□ -0.06
PTPRE-203ENST00000442830 HOXC11O43248 304 aaPredicted RBP14.64□□□□□ -0.07
PTPRE-203ENST00000442830 KIF20AO95235 890 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 RPN1P04843 607 aaKnown RBP14.64□□□□□ -0.07
PTPRE-203ENST00000442830 MYL6P60660 151 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 CLDN10P78369 228 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 ZXDBP98169 803 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 GAB4Q2WGN9 574 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 N4BP2L1Q5TBK1 243 aaPredicted RBP14.64□□□□□ -0.07
PTPRE-203ENST00000442830 SCARA3Q6AZY7 606 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 FAM35AQ86V20 835 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 UNC93AQ86WB7 457 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 MDGA1Q8NFP4 955 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 OLIG1Q8TAK6 271 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 NUSAP1Q9BXS6 441 aaKnown RBP14.64□□□□□ -0.07
PTPRE-203ENST00000442830 B3GNT5Q9BYG0 378 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 NACA2Q9H009 215 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 SMPD4Q9NXE4 827 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 IL37Q9NZH6 218 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 BCCIPQ9P287 314 aaKnown RBP eCLIP14.64□□□□□ -0.07
PTPRE-203ENST00000442830 USP25Q9UHP3 1055 aa14.64□□□□□ -0.07
PTPRE-203ENST00000442830 TNRC6BQ9UPQ9 1833 aaKnown RBP14.64□□□□□ -0.07
PTPRE-203ENST00000442830 CEP192Q8TEP8 1941 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 LNP1A1A4G5 178 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 FAM92AA1XBS5 289 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 TNFRSF10BO14763 440 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 DCLK1O15075 740 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 MAP3K13O43283 966 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 KLF8O95600 359 aaPredicted RBP14.63□□□□□ -0.07
PTPRE-203ENST00000442830 CSRP1P21291 193 aaKnown RBP14.63□□□□□ -0.07
PTPRE-203ENST00000442830 HOXC13P31276 330 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 P2RY2P41231 377 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 ME1P48163 572 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 SLC5A3P53794 718 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 NCOA4Q13772 614 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 E2F5Q15329 346 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 SGSM1Q2NKQ1 1148 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 RHBDF2Q6PJF5 856 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 SLC36A4Q6YBV0 504 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 IL17RCQ8NAC3 791 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 PARD3BQ8TEW8 1205 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 SNX21Q969T3 373 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 TPSD1Q9BZJ3 242 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 IMPG2Q9BZV3 1241 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 DPEP3Q9H4B8 488 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.63□□□□□ -0.073e-10■■■■■ 153.8
PTPRE-203ENST00000442830 TLR8Q9NR97 1041 aaKnown RBP14.63□□□□□ -0.07
PTPRE-203ENST00000442830 RXFP3Q9NSD7 469 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 EXOC1Q9NV70 894 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 DEC1Q9P2X7 70 aa14.63□□□□□ -0.07
PTPRE-203ENST00000442830 CLDN5O00501 218 aa14.62□□□□□ -0.07
PTPRE-203ENST00000442830 IKBKBO14920 756 aa14.62□□□□□ -0.07
PTPRE-203ENST00000442830 COCHO43405 550 aa14.62□□□□□ -0.07
PTPRE-203ENST00000442830 AP1G2O75843 785 aa14.62□□□□□ -0.07
PTPRE-203ENST00000442830 HSP90AA1P07900 732 aaKnown RBP14.62□□□□□ -0.07
PTPRE-203ENST00000442830 SLFN14P0C7P3 912 aa14.62□□□□□ -0.07
PTPRE-203ENST00000442830 ZDHHC11BP0C7U3 371 aa14.62□□□□□ -0.07
PTPRE-203ENST00000442830 CEACAM1P13688 526 aa14.62□□□□□ -0.07
PTPRE-203ENST00000442830 TIE1P35590 1138 aa14.62□□□□□ -0.07
PTPRE-203ENST00000442830 KIR2DL1P43626 348 aaPredicted RBP14.62□□□□□ -0.07
PTPRE-203ENST00000442830 DHPSP49366 369 aaPredicted RBP14.62□□□□□ -0.07
PTPRE-203ENST00000442830 NOVA1P51513 510 aaKnown RBP14.62□□□□□ -0.07
PTPRE-203ENST00000442830 IFRD2Q12894 506 aaPredicted RBP14.62□□□□□ -0.07
PTPRE-203ENST00000442830 RESP18Q5W5W9 173 aa14.62□□□□□ -0.07
PTPRE-203ENST00000442830 PSAPL1Q6NUJ1 521 aa14.62□□□□□ -0.07
PTPRE-203ENST00000442830 TADA2BQ86TJ2 420 aa14.62□□□□□ -0.07
PTPRE-203ENST00000442830 CCDC33Q8N5R6 958 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms