RNA–Protein interactions for RNA: ENST00000440346.1

PTPA-221, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-221ENST00000440346 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
PTPA-221ENST00000440346 STK33Q9BYT3 514 aa7.55□□□□□ -1.2
PTPA-221ENST00000440346 TRIM5Q9C035 493 aa7.55□□□□□ -1.2
PTPA-221ENST00000440346 TTYH3Q9C0H2 523 aa7.55□□□□□ -1.2
PTPA-221ENST00000440346 CHRDQ9H2X0 955 aa7.55□□□□□ -1.2
PTPA-221ENST00000440346 ABCB6Q9NP58 842 aa7.55□□□□□ -1.2
PTPA-221ENST00000440346 FAM207AQ9NSI2 230 aaPredicted RBP7.55□□□□□ -1.2
PTPA-221ENST00000440346 NCDNQ9UBB6 729 aa7.55□□□□□ -1.2
PTPA-221ENST00000440346 AFF4Q9UHB7 1163 aaKnown RBP7.55□□□□□ -1.2
PTPA-221ENST00000440346 SMG5Q9UPR3 1016 aaKnown RBP7.55□□□□□ -1.2
PTPA-221ENST00000440346 NME7Q9Y5B8 376 aa7.55□□□□□ -1.2
PTPA-221ENST00000440346 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.55□□□□□ -1.2
PTPA-221ENST00000440346 INSL5Q9Y5Q6 135 aa7.55□□□□□ -1.2
PTPA-221ENST00000440346 ATP8B3O60423 1300 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 MTMR11A4FU01 709 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 F8VZ95 297 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 NCAM2O15394 837 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 PDGFRBP09619 1106 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 CCDC172P0C7W6 258 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 VDRP11473 427 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 HOXB3P14651 431 aaPredicted RBP7.54□□□□□ -1.2
PTPA-221ENST00000440346 ACAT1P24752 427 aaKnown RBP7.54□□□□□ -1.2
PTPA-221ENST00000440346 MAGEA11P43364 429 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 TUFMP49411 452 aaKnown RBP7.54□□□□□ -1.2
PTPA-221ENST00000440346 RAD23BP54727 409 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 EPHA5P54756 1037 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 JAM2P57087 298 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 BPIFB4P59827 614 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 POLR2FP61218 127 aaKnown RBP7.54□□□□□ -1.2
PTPA-221ENST00000440346 PLD1Q13393 1074 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 GRM2Q14416 872 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 ARHGAP44Q17R89 818 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 SLC39A12Q504Y0 691 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 ARHGAP17Q68EM7 881 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 SPECC1LQ69YQ0 1117 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 IQCEQ6IPM2 695 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 GJB7Q6PEY0 223 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 TMEM270Q6UE05 265 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 VSTM1Q6UX27 236 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 VITQ6UXI7 678 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 RNF19BQ6ZMZ0 732 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 CACNA2D4Q7Z3S7 1137 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 VSTM4Q8IW00 320 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 FAM71AQ8IYT1 594 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 HS6ST3Q8IZP7 471 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 SLC4A11Q8NBS3 891 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 RBBP8NLQ8NC74 664 aaPredicted RBP7.54□□□□□ -1.2
PTPA-221ENST00000440346 KAT5Q92993 513 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 ZSWIM3Q96MP5 696 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 SPAG5Q96R06 1193 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 CORO1BQ9BR76 489 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 FAM126AQ9BYI3 521 aaPredicted RBP7.54□□□□□ -1.2
PTPA-221ENST00000440346 GPR88Q9GZN0 384 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 ELOVL4Q9GZR5 314 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 NUCKS1Q9H1E3 243 aaKnown RBP7.54□□□□□ -1.2
PTPA-221ENST00000440346 DPEP3Q9H4B8 488 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 BRD9Q9H8M2 597 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 TRPV4Q9HBA0 871 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 CYP4F11Q9HBI6 524 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 ZFP14Q9HCL3 533 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 PARD6AQ9NPB6 346 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 CRTAC1Q9NQ79 661 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 TRPV5Q9NQA5 729 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.54□□□□□ -1.27e-6■■■■■ 74.5
PTPA-221ENST00000440346 HMGXB4Q9UGU5 601 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 GTF3C4Q9UKN8 822 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 MRPS17Q9Y2R5 130 aaKnown RBP7.54□□□□□ -1.2
PTPA-221ENST00000440346 PCDHB5Q9Y5E4 795 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 PCDHB4Q9Y5E5 795 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 FHOD1Q9Y613 1164 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 CHD6Q8TD26 2715 aa7.54□□□□□ -1.2
PTPA-221ENST00000440346 LAMA1P25391 3075 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 CEP295Q9C0D2 2601 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 KIAA1549LQ6ZVL6 1849 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 MYBPHLA2RUH7 354 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 ARNTLO00327 626 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 MAN2B1O00754 1011 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 ZNF197O14709 1029 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 EPHB6O15197 1021 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 AP5Z1O43299 807 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 MED7O43513 233 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 HCRTO43612 131 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 ATP2C2O75185 946 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 VNN2O95498 520 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 OR4Q2P0C623 313 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 GJA1P17302 382 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 CDC25BP30305 580 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 ELF1P32519 619 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 SOX5P35711 763 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 VIPR2P41587 438 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 STAT1P42224 750 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 KLK7P49862 253 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 ATXN1P54253 815 aaKnown RBP7.53□□□□□ -1.2
PTPA-221ENST00000440346 ARPP19P56211 112 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 PSMC1P62191 440 aaKnown RBP7.53□□□□□ -1.2
PTPA-221ENST00000440346 APBA1Q02410 837 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 PTK2Q05397 1052 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 RAPGEF1Q13905 1077 aa7.53□□□□□ -1.2
PTPA-221ENST00000440346 DRAP1Q14919 205 aaPredicted RBP7.53□□□□□ -1.2
PTPA-221ENST00000440346 SGO2Q562F6 1265 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms