RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 GRIK1P39086 918 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 CACNA2D1P54289 1103 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 CUL1Q13616 776 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 DHX34Q14147 1143 aaKnown RBP15.76■□□□□ 0.11
CPSF7-205ENST00000439958 CLLU1OSQ5K130 101 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 OLFML1Q6UWY5 402 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 FAM35AQ86V20 835 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 CRYBG2Q8N1P7 616 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 GPR152Q8TDT2 470 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 FAXDC2Q96IV6 333 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 PWWP2AQ96N64 755 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 TSEN34Q9BSV6 310 aaKnown RBP15.76■□□□□ 0.11
CPSF7-205ENST00000439958 DCLK3Q9C098 648 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 TCRBV5S1A1TA0A578 114 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 TBKBP1A7MCY6 615 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 FSCN2O14926 492 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 TRIM60Q495X7 471 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 CCDC14Q49A88 953 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 NPNTQ6UXI9 565 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 THEM5Q8N1Q8 247 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 SLC7A14Q8TBB6 771 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 DUSP16Q9BY84 665 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 FAM114A2Q9NRY5 505 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 TBC1D13Q9NVG8 400 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 DCDC2CA8MYV0 355 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 H7C0C1 242 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 CREB3O43889 395 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 ZNF623O75123 536 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 SETSIPP0DME0 302 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 NCAM1P13591 858 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 WARSP23381 471 aaKnown RBP15.76■□□□□ 0.11
CPSF7-205ENST00000439958 ATP5OP48047 213 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 NRLP54845 237 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 PITX1P78337 314 aaPredicted RBP15.76■□□□□ 0.11
CPSF7-205ENST00000439958 BYSLQ13895 437 aaKnown RBP15.76■□□□□ 0.11
CPSF7-205ENST00000439958 FAM171A1Q5VUB5 890 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 CLEC20AQ6ZU45 233 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 ACTL9Q8TC94 416 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 SEPT8Q92599 483 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 PEBP4Q96S96 227 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 TMPRSS4Q9NRS4 437 aa15.76■□□□□ 0.11
CPSF7-205ENST00000439958 DDX56Q9NY93 547 aaKnown RBP15.76■□□□□ 0.11
CPSF7-205ENST00000439958 MTRF1LQ9UGC7 380 aaKnown RBP15.76■□□□□ 0.11
CPSF7-205ENST00000439958 DNM1LO00429 736 aa15.75■□□□□ 0.11
CPSF7-205ENST00000439958 GABBR2O75899 941 aa15.75■□□□□ 0.11
CPSF7-205ENST00000439958 RPL9P32969 192 aaKnown RBP15.75■□□□□ 0.11
CPSF7-205ENST00000439958 OTUD4Q01804 1114 aaKnown RBP15.75■□□□□ 0.11
CPSF7-205ENST00000439958 SLC39A12Q504Y0 691 aa15.75■□□□□ 0.11
CPSF7-205ENST00000439958 CEP85LQ5SZL2 805 aa15.75■□□□□ 0.11
CPSF7-205ENST00000439958 CCDC89Q8N998 374 aa15.75■□□□□ 0.11
CPSF7-205ENST00000439958 LINC01599Q8WXQ3 324 aa15.75■□□□□ 0.11
CPSF7-205ENST00000439958 M0QYT0 321 aa15.75■□□□□ 0.11
CPSF7-205ENST00000439958 MAN1A1P33908 653 aa15.75■□□□□ 0.11
CPSF7-205ENST00000439958 DSC3Q14574 896 aa15.75■□□□□ 0.11
CPSF7-205ENST00000439958 HFE2Q6ZVN8 426 aa15.75■□□□□ 0.11
CPSF7-205ENST00000439958 GPRIN1Q7Z2K8 1008 aa15.75■□□□□ 0.11
CPSF7-205ENST00000439958 SPATA2LQ8IUW3 424 aaPredicted RBP15.75■□□□□ 0.11
CPSF7-205ENST00000439958 RSAD2Q8WXG1 361 aa15.75■□□□□ 0.11
CPSF7-205ENST00000439958 RSPH1Q8WYR4 309 aa15.75■□□□□ 0.11
CPSF7-205ENST00000439958 C9IYK1 514 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 KDELR1P24390 212 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 ARHGAP17Q68EM7 881 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 RPAINQ86UA6 219 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 TBCBQ99426 244 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 SLC4A5Q9BY07 1137 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 GOLGA6L10A6NI86 522 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 SLC25A11Q02978 314 aaKnown RBP15.74■□□□□ 0.11
CPSF7-205ENST00000439958 CA9Q16790 459 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 FAM126BQ8IXS8 530 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.74■□□□□ 0.11
CPSF7-205ENST00000439958 OR10T2Q8NGX3 314 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 ATL2Q8NHH9 583 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 MRRFQ96E11 262 aaKnown RBP15.74■□□□□ 0.11
CPSF7-205ENST00000439958 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.74■□□□□ 0.115e-9■■□□□ 12.4
CPSF7-205ENST00000439958 NAALADL1Q9UQQ1 740 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 PLAAQ9Y263 795 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 MYO7AQ13402 2215 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 TRUB2O95900 331 aaKnown RBP15.74■□□□□ 0.11
CPSF7-205ENST00000439958 CPB1P15086 417 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 CYP2F1P24903 491 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 NUMBP49757 651 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 ARSEP51690 589 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 GPS1Q13098 491 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 SIX1Q15475 284 aaPredicted RBP15.74■□□□□ 0.11
CPSF7-205ENST00000439958 MRPL10Q7Z7H8 261 aaKnown RBP15.74■□□□□ 0.11
CPSF7-205ENST00000439958 TMEM110Q86TL2 294 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 SPATA18Q8TC71 538 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 GRK7Q8WTQ7 553 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 HNRNPABQ99729 332 aaKnown RBP15.74■□□□□ 0.11
CPSF7-205ENST00000439958 UBN1Q9NPG3 1134 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 RGS18Q9NS28 235 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 PHF24Q9UPV7 400 aa15.74■□□□□ 0.11
CPSF7-205ENST00000439958 hCG_1818297A0A087WSY0 165 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 FAM187AA6NFU0 413 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 MAP2K7O14733 419 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 CDKN2BP42772 138 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 DARS2Q6PI48 645 aaKnown RBP15.73■□□□□ 0.11
CPSF7-205ENST00000439958 MAP7D3Q8IWC1 876 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 TMEM86AQ8N2M4 240 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 GLIS1Q8NBF1 620 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms