RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 SKAP2O75563 359 aaPredicted RBP8.07□□□□□ -1.12
HCG20-208ENST00000439406 RPS6KA5O75582 802 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 SLITRK5O94991 958 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 HNRNPCP07910 306 aaKnown RBP eCLIP8.07□□□□□ -1.12
HCG20-208ENST00000439406 FAM200BP0CF97 657 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 CPB1P15086 417 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 XBP1P17861 261 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 ITIH2P19823 946 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 EPHA1P21709 976 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 CDC25BP30305 580 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 CD52P31358 61 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 AGFG1P52594 562 aaKnown RBP8.07□□□□□ -1.12
HCG20-208ENST00000439406 RNF4P78317 190 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 MRPS6P82932 125 aaKnown RBP8.07□□□□□ -1.12
HCG20-208ENST00000439406 KRT17Q04695 432 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 PAN2Q504Q3 1202 aaKnown RBP8.07□□□□□ -1.12
HCG20-208ENST00000439406 ASPRV1Q53RT3 343 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 ZBTB37Q5TC79 503 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 CWF19L1Q69YN2 538 aaKnown RBP8.07□□□□□ -1.12
HCG20-208ENST00000439406 CASC1Q6TDU7 716 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 MFSD6Q6ZSS7 791 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 THNSL1Q8IYQ7 743 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 ESX1Q8N693 406 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 FBXO18Q8NFZ0 1043 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 CYP2W1Q8TAV3 490 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 DNAJB3Q8WWF6 145 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 EXOC4Q96A65 974 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 WDR89Q96FK6 387 aaPredicted RBP8.07□□□□□ -1.12
HCG20-208ENST00000439406 TSPAN18Q96SJ8 248 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 DPH2Q9BQC3 489 aaPredicted RBP8.07□□□□□ -1.12
HCG20-208ENST00000439406 CHCHD6Q9BRQ6 235 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 POMKQ9H5K3 350 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 BRD9Q9H8M2 597 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 JMJD4Q9H9V9 463 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 WASH6PQ9NQA3 447 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 VPS45Q9NRW7 570 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 IRAK4Q9NWZ3 460 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 PADI3Q9ULW8 664 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 PCDHA1Q9Y5I3 950 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 SPO11Q9Y5K1 396 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 CDY2AQ9Y6F7 541 aa8.07□□□□□ -1.12
HCG20-208ENST00000439406 CEP250Q9BV73 2442 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 GCOM1H8Y6P7 765 aaPredicted RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 J3QL48 77 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 FFAR2O15552 330 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 KDM1AO60341 852 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 POLR2MP0CAP2 368 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 TNNT1P13805 278 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 H2AFXP16104 143 aaPredicted RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 LAG3P18627 525 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 SP100P23497 879 aaPredicted RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 CLK1P49759 484 aaKnown RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 C19orf57Q0VDD7 668 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 SCRN1Q12765 414 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 TDGQ13569 410 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 PDCD1Q15116 288 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 ZRSR1Q15695 479 aaKnown RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 ZSCAN26Q16670 478 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 RSPO4Q2I0M5 234 aaPredicted RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 FRMD7Q6ZUT3 714 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 DAAM2Q86T65 1068 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 FAM35AQ86V20 835 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 CHD1LQ86WJ1 897 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 VWA5B2Q8N398 1253 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 PRR18Q8N4B5 295 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 CISD2Q8N5K1 135 aaKnown RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 MRPL43Q8N983 215 aaKnown RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 TDRD5Q8NAT2 981 aaKnown RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 COLGALT1Q8NBJ5 622 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 LINC01599Q8WXQ3 324 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 CENPIQ92674 756 aaPredicted RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 ESR2Q92731 530 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 FBXW5Q969U6 566 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 INPP4AQ96PE3 977 aaPredicted RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 TCF25Q9BQ70 676 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 SMG9Q9H0W8 520 aaKnown RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 RNF41Q9H4P4 317 aaPredicted RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 BCAS3Q9H6U6 928 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 TTC12Q9H892 705 aaPredicted RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 VAT1LQ9HCJ6 419 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 ERAP1Q9NZ08 941 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 PPARGC1AQ9UBK2 798 aaKnown RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 WNT16Q9UBV4 365 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 TUBE1Q9UJT0 475 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 GDF2Q9UK05 429 aaPredicted RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 SLC13A4Q9UKG4 626 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 RNF112Q9ULX5 631 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 SF3B6Q9Y3B4 125 aaKnown RBP8.06□□□□□ -1.12
HCG20-208ENST00000439406 ATP6V1DQ9Y5K8 247 aa8.06□□□□□ -1.12
HCG20-208ENST00000439406 IGSF9BQ9UPX0 1349 aa8.05□□□□□ -1.12
HCG20-208ENST00000439406 KDM3AQ9Y4C1 1321 aa8.05□□□□□ -1.12
HCG20-208ENST00000439406 PLXNA4Q9HCM2 1894 aa8.05□□□□□ -1.12
HCG20-208ENST00000439406 CHD8Q9HCK8 2581 aa8.05□□□□□ -1.12
HCG20-208ENST00000439406 TTC24A2A3L6 582 aaPredicted RBP8.05□□□□□ -1.12
HCG20-208ENST00000439406 TTLL8A6PVC2 850 aa8.05□□□□□ -1.12
HCG20-208ENST00000439406 TBKBP1A7MCY6 615 aa8.05□□□□□ -1.12
HCG20-208ENST00000439406 PRR5-ARHGAP8B1AHC4 643 aa8.05□□□□□ -1.12
HCG20-208ENST00000439406 FOXN3O00409 490 aaPredicted RBP8.05□□□□□ -1.12
HCG20-208ENST00000439406 ZBTB5O15062 677 aa8.05□□□□□ -1.12
HCG20-208ENST00000439406 MEFVO15553 781 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms