RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 LCMT1Q9UIC8 334 aa21.76■■□□□ 1.07
CHD3-204ENST00000439235 COL4A4P53420 1690 aaPredicted RBP21.75■■□□□ 1.07
CHD3-204ENST00000439235 TCRBV5S1A1TA0A578 114 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 DLL1O00548 723 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 CLASP2O75122 1294 aaKnown RBP21.75■■□□□ 1.07
CHD3-204ENST00000439235 KRT3P12035 628 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 ATF6P18850 670 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 DAOAP59103 153 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 MRPS5P82675 430 aaKnown RBP21.75■■□□□ 1.07
CHD3-204ENST00000439235 EFHC1Q5JVL4 640 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 SDHAF4Q5VUM1 108 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 LLGL2Q6P1M3 1020 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 DCUN1D2Q6PH85 259 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 RTL10Q7L3V2 364 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 SLC26A9Q7LBE3 791 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 FEZF2Q8TBJ5 459 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 METTL5Q9NRN9 209 aaKnown RBP21.75■■□□□ 1.07
CHD3-204ENST00000439235 ASNSD1Q9NWL6 643 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 USP3Q9Y6I4 520 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 DUSP10Q9Y6W6 482 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 PATJQ8NI35 1801 aa21.75■■□□□ 1.07
CHD3-204ENST00000439235 SIGLEC16A6NMB1 481 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 SLC38A8A6NNN8 435 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 ESPNB1AK53 854 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 KIF5CO60282 957 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 GLI1P08151 1106 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 CSH1P0DML2 217 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 CSH2P0DML3 217 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 EPHB3P54753 998 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 PPP1R15BQ5SWA1 713 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 SLC7A14Q8TBB6 771 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 HDAC7Q8WUI4 952 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 GOLGA1Q92805 767 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 MCEEQ96PE7 176 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 CDCA3Q99618 268 aaPredicted RBP21.74■■□□□ 1.07
CHD3-204ENST00000439235 TRIM62Q9BVG3 475 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 PLEKHA4Q9H4M7 779 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 OSGEPQ9NPF4 335 aa21.74■■□□□ 1.07
CHD3-204ENST00000439235 CHORDC1Q9UHD1 332 aaPredicted RBP21.74■■□□□ 1.07
CHD3-204ENST00000439235 BUB1O43683 1085 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 HSF2BPO75031 334 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 LRG1P02750 347 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 C8AP07357 584 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 USP17L7P0C7H9 530 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 TWF1Q12792 350 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 IFRD2Q12894 506 aaPredicted RBP21.73■■□□□ 1.07
CHD3-204ENST00000439235 PM20D1Q6GTS8 502 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 ITIH5Q86UX2 942 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 GIPC2Q8TF65 315 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 CLEC4CQ8WTT0 213 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 ALS2CR12Q96Q35 445 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 TLE6Q9H808 572 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 IL37Q9NZH6 218 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 SALL4Q9UJQ4 1053 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 ANAPC7Q9UJX3 599 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 COG5Q9UP83 839 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 SCML2Q9UQR0 700 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 PAXBP1Q9Y5B6 917 aa21.73■■□□□ 1.07
CHD3-204ENST00000439235 TRIOBPQ9H2D6 2365 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 MOCS3O95396 460 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 ABL1P00519 1130 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 SPATA31D3P0C874 917 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 YWHAQP27348 245 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 TAF12Q16514 161 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 DUSP6Q16828 381 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 PPM1LQ5SGD2 360 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 SPATA31D4Q6ZUB0 917 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 ARCQ7LC44 396 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 ARHGAP18Q8N392 663 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 SCAMP5Q8TAC9 235 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 GPR152Q8TDT2 470 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 SLC22A17Q8WUG5 538 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 FAM149B1Q96BN6 582 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 PIWIL1Q96J94 861 aaKnown RBP21.72■■□□□ 1.07
CHD3-204ENST00000439235 TTLL2Q9BWV7 592 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 MAN1C1Q9NR34 630 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 TMEM59LQ9UK28 342 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 ASB3Q9Y575 518 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 SZT2Q5T011 3432 aa21.72■■□□□ 1.07
CHD3-204ENST00000439235 FAM92AA1XBS5 289 aa21.71■■□□□ 1.07
CHD3-204ENST00000439235 TMEM191CA6NGB0 347 aa21.71■■□□□ 1.07
CHD3-204ENST00000439235 RFXAPO00287 272 aa21.71■■□□□ 1.07
CHD3-204ENST00000439235 DAB1O75553 588 aa21.71■■□□□ 1.07
CHD3-204ENST00000439235 GJB6O95452 261 aa21.71■■□□□ 1.07
CHD3-204ENST00000439235 DESP17661 470 aa21.71■■□□□ 1.07
CHD3-204ENST00000439235 ADGRD2Q7Z7M1 963 aa21.71■■□□□ 1.07
CHD3-204ENST00000439235 ELMOD1Q8N336 334 aa21.71■■□□□ 1.07
CHD3-204ENST00000439235 TRIM58Q8NG06 486 aa21.71■■□□□ 1.07
CHD3-204ENST00000439235 TPCN2Q8NHX9 752 aa21.71■■□□□ 1.07
CHD3-204ENST00000439235 FNIP1Q8TF40 1166 aa21.71■■□□□ 1.07
CHD3-204ENST00000439235 FBXO32Q969P5 355 aa21.71■■□□□ 1.07
CHD3-204ENST00000439235 MYO1FO00160 1098 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 LTFP02788 710 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 HOXA9P31269 272 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 NRIP1P48552 1158 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 RNASE9P60153 205 aaKnown RBP21.7■■□□□ 1.06
CHD3-204ENST00000439235 USP46P62068 366 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 YWHAZP63104 245 aaKnown RBP21.7■■□□□ 1.06
CHD3-204ENST00000439235 C11orf63Q6NUN7 778 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 RBM23Q86U06 439 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms