RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 WHRNQ9P202 907 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 PIAS1O75925 651 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 CDH3P22223 829 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 KRT76Q01546 638 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 FOLH1Q04609 750 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 ANKLE1Q8NAG6 615 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 RNF169Q8NCN4 708 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 PLEKHO2Q8TD55 490 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 RSAD2Q8WXG1 361 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 SRPK1Q96SB4 655 aaKnown RBP16.42■□□□□ 0.22
DHFR-201ENST00000439211 MSTO1Q9BUK6 570 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 NEU2Q9Y3R4 380 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 MYL2P10916 166 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 PDIA2Q13087 525 aaKnown RBP16.42■□□□□ 0.22
DHFR-201ENST00000439211 MYBPC2Q14324 1141 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 OASLQ15646 514 aaKnown RBP16.42■□□□□ 0.22
DHFR-201ENST00000439211 BBS9Q3SYG4 887 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 DNAL1Q4LDG9 190 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 ANKRD20A4Q4UJ75 823 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 WDR78Q5VTH9 848 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 ITPRIPL1Q6GPH6 555 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 DHDDSQ86SQ9 333 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 ZDHHC14Q8IZN3 488 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 RFWD2Q8NHY2 731 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 C10orf82Q8WW14 230 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 ZFRQ96KR1 1074 aaKnown RBP16.42■□□□□ 0.22
DHFR-201ENST00000439211 FIZ1Q96SL8 496 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 POLR3FQ9H1D9 316 aaPredicted RBP16.42■□□□□ 0.22
DHFR-201ENST00000439211 STK32BQ9NY57 414 aa16.42■□□□□ 0.22
DHFR-201ENST00000439211 MARCOQ9UEW3 520 aaPredicted RBP16.42■□□□□ 0.22
DHFR-201ENST00000439211 MTO1Q9Y2Z2 717 aaKnown RBP16.42■□□□□ 0.22
DHFR-201ENST00000439211 AHDC1Q5TGY3 1603 aaPredicted RBP16.42■□□□□ 0.22
DHFR-201ENST00000439211 GIPC1O14908 333 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 OXSR1O95747 527 aaPredicted RBP16.41■□□□□ 0.22
DHFR-201ENST00000439211 PDGFRBP09619 1106 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 NCKAP1LP55160 1127 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 GEMIN4P57678 1058 aaKnown RBP16.41■□□□□ 0.22
DHFR-201ENST00000439211 PACS1Q6VY07 963 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 CTAGE3PQ8IX95 158 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 FERMT1Q9BQL6 677 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 INIPQ9NRY2 104 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 TBCCD1Q9NVR7 557 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 NINJ2Q9NZG7 142 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 NXF1Q9UBU9 619 aaKnown RBP16.41■□□□□ 0.22
DHFR-201ENST00000439211 BIRC5O15392 142 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 GMNNO75496 209 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 ICAM1P05362 532 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 ZSCAN5DPP0CG00 497 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 CAV1Q03135 178 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 RELAQ04206 551 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 SPP2Q13103 211 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 PSMD6Q15008 389 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 CLEC16AQ2KHT3 1053 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 ATP13A4Q4VNC1 1196 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 MCOLN2Q8IZK6 566 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 DIS3LQ8TF46 1054 aaKnown RBP16.41■□□□□ 0.22
DHFR-201ENST00000439211 DDI1Q8WTU0 396 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 HAUS8Q9BT25 410 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 TXLNGYQ9BZA5 131 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 RBAKQ9NYW8 714 aaPredicted RBP16.41■□□□□ 0.22
DHFR-201ENST00000439211 COL20A1Q9P218 1284 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 AGO2Q9UKV8 859 aaKnown RBP16.41■□□□□ 0.22
DHFR-201ENST00000439211 SRGAP2CP0DJJ0 459 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 SRGAP2BP0DMP2 458 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 IDO1P14902 403 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 MX2P20592 715 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 MUTP22033 750 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 MAP3K10Q02779 954 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 PDAP1Q13442 181 aaKnown RBP16.41■□□□□ 0.22
DHFR-201ENST00000439211 PDK4Q16654 411 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 SEC14L1Q92503 715 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 TTC25Q96NG3 672 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 SHCBP1LQ9BZQ2 653 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 XAB2Q9HCS7 855 aaKnown RBP16.41■□□□□ 0.22
DHFR-201ENST00000439211 RNF146Q9NTX7 359 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 CARD8Q9Y2G2 431 aa16.41■□□□□ 0.22
DHFR-201ENST00000439211 C2orf71A6NGG8 1288 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 TTLL13PA6NNM8 815 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 KRT4P19013 534 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 PRPF39Q86UA1 669 aaKnown RBP16.4■□□□□ 0.22
DHFR-201ENST00000439211 LMO3Q8TAP4 145 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 DCLK3Q9C098 648 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 NOCTQ9UK39 431 aaKnown RBP16.4■□□□□ 0.22
DHFR-201ENST00000439211 DDX60LQ5H9U9 1706 aaKnown RBP16.4■□□□□ 0.22
DHFR-201ENST00000439211 MYH11P35749 1972 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 PEX2P28328 305 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 HOXD11P31277 338 aaPredicted RBP16.4■□□□□ 0.22
DHFR-201ENST00000439211 C21orf59P57076 290 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 BASP1P80723 227 aaKnown RBP16.4■□□□□ 0.22
DHFR-201ENST00000439211 TFAMQ00059 246 aaKnown RBP16.4■□□□□ 0.22
DHFR-201ENST00000439211 PKN2Q16513 984 aaKnown RBP16.4■□□□□ 0.22
DHFR-201ENST00000439211 KIAA2013Q8IYS2 634 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 GSTCDQ8NEC7 633 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 SYTL5Q8TDW5 730 aaPredicted RBP16.4■□□□□ 0.22
DHFR-201ENST00000439211 PYROXD1Q8WU10 500 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 IFT122Q9HBG6 1241 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 H3BSA7 217 aa16.4■□□□□ 0.22
DHFR-201ENST00000439211 CYP1A2P05177 515 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms