RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 TNFAIP8L3Q5GJ75 292 aa9.91□□□□□ -0.82
CUX1-206ENST00000437600 PPP1R26Q5T8A7 1209 aaPredicted RBP9.91□□□□□ -0.82
CUX1-206ENST00000437600 PMF1Q6P1K2 205 aa9.91□□□□□ -0.82
CUX1-206ENST00000437600 IGDCC3Q8IVU1 814 aa9.91□□□□□ -0.82
CUX1-206ENST00000437600 SPATA18Q8TC71 538 aa9.91□□□□□ -0.82
CUX1-206ENST00000437600 MAIP1Q8WWC4 291 aa9.91□□□□□ -0.82
CUX1-206ENST00000437600 RSAD2Q8WXG1 361 aa9.91□□□□□ -0.82
CUX1-206ENST00000437600 RBM41Q96IZ5 413 aaKnown RBP9.91□□□□□ -0.82
CUX1-206ENST00000437600 SERPINB12Q96P63 405 aa9.91□□□□□ -0.82
CUX1-206ENST00000437600 TGS1Q96RS0 853 aaKnown RBP9.91□□□□□ -0.82
CUX1-206ENST00000437600 HOMER3Q9NSC5 361 aa9.91□□□□□ -0.82
CUX1-206ENST00000437600 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.91□□□□□ -0.823e-6■□□□□ 8.8
CUX1-206ENST00000437600 COX16Q9P0S2 106 aa9.91□□□□□ -0.82
CUX1-206ENST00000437600 TSPAN16Q9UKR8 245 aa9.91□□□□□ -0.82
CUX1-206ENST00000437600 USP18Q9UMW8 372 aa9.91□□□□□ -0.82
CUX1-206ENST00000437600 PTCH2Q9Y6C5 1203 aa9.91□□□□□ -0.82
CUX1-206ENST00000437600 MRPL42Q9Y6G3 142 aaKnown RBP9.91□□□□□ -0.82
CUX1-206ENST00000437600 EYSQ5T1H1 3165 aa9.91□□□□□ -0.82
CUX1-206ENST00000437600 SIGLEC16A6NMB1 481 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 DNALI1O14645 258 aaPredicted RBP9.9□□□□□ -0.82
CUX1-206ENST00000437600 RBP3P10745 1247 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 RPL22P35268 128 aaKnown RBP9.9□□□□□ -0.82
CUX1-206ENST00000437600 GPD2P43304 727 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 VCPP55072 806 aaKnown RBP9.9□□□□□ -0.82
CUX1-206ENST00000437600 YWHAEP62258 255 aaKnown RBP9.9□□□□□ -0.82
CUX1-206ENST00000437600 OASLQ15646 514 aaKnown RBP9.9□□□□□ -0.82
CUX1-206ENST00000437600 FSCN1Q16658 493 aaKnown RBP9.9□□□□□ -0.82
CUX1-206ENST00000437600 CA9Q16790 459 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 MFSD14CQ5VZR4 134 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 RXFP2Q8WXD0 754 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 KCNN1Q92952 543 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 MRPL45Q9BRJ2 306 aaKnown RBP9.9□□□□□ -0.82
CUX1-206ENST00000437600 AP5M1Q9H0R1 490 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 ADAMTS10Q9H324 1103 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 DPEP3Q9H4B8 488 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 SLC40A1Q9NP59 571 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 DPP3Q9NY33 737 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 GRID1Q9ULK0 1009 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 CCT8L1PA6NM43 557 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 MEIS3P2A8K0S8 358 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 GPR32O75388 356 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 MCF2P10911 925 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 AKR1A1P14550 325 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 GBP1P32455 592 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 PSEN2P49810 448 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 GPX6P59796 221 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 PIGWQ7Z7B1 504 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 ROPN1BQ9BZX4 212 aaPredicted RBP9.9□□□□□ -0.82
CUX1-206ENST00000437600 ROPN1Q9HAT0 212 aaPredicted RBP9.9□□□□□ -0.82
CUX1-206ENST00000437600 CHMP2BQ9UQN3 213 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 NME7Q9Y5B8 376 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 CITO14578 2027 aa9.9□□□□□ -0.82
CUX1-206ENST00000437600 CEP290O15078 2479 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 FKTNO75072 461 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 CILPO75339 1184 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 FAM155BO75949 473 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 RNF8O76064 485 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 RECQL4O94761 1208 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 TMEM63AO94886 807 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 UBOX5O94941 541 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 FGFR1P11362 822 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 LMO2P25791 158 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 SPDYCQ5MJ68 293 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 CXorf38Q8TB03 319 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 CPT1BQ92523 772 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 RMDN2Q96LZ7 410 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 WDR83Q9BRX9 315 aaKnown RBP9.9□□□□□ -0.83
CUX1-206ENST00000437600 BEGAINQ9BUH8 593 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 MAK16Q9BXY0 300 aaKnown RBP9.9□□□□□ -0.83
CUX1-206ENST00000437600 NFKBIZQ9BYH8 718 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 GCOM2Q9BZD3 368 aaPredicted RBP9.9□□□□□ -0.83
CUX1-206ENST00000437600 TMPRSS4Q9NRS4 437 aa9.9□□□□□ -0.83
CUX1-206ENST00000437600 ANK1P16157 1881 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 MYO18AQ92614 2054 aaKnown RBP9.89□□□□□ -0.83
CUX1-206ENST00000437600 C5orf60A6NFR6 353 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 SNX3O60493 162 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 CDH16O75309 829 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 IGHA2P01877 340 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 KRT4P19013 534 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 AP3M2P53677 418 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 EIF3EP60228 445 aaKnown RBP9.89□□□□□ -0.83
CUX1-206ENST00000437600 E2F5Q15329 346 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 SURF1Q15526 300 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 SLC1A5Q15758 541 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 RNASEH2BQ5TBB1 312 aaKnown RBP9.89□□□□□ -0.83
CUX1-206ENST00000437600 MFSD5Q6N075 450 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 DARS2Q6PI48 645 aaKnown RBP9.89□□□□□ -0.83
CUX1-206ENST00000437600 FAM183BPQ6ZVS7 135 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 CEP57Q86XR8 500 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 ZCCHC9Q8N567 271 aaKnown RBP9.89□□□□□ -0.83
CUX1-206ENST00000437600 FBXO36Q8NEA4 188 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 OR6B3Q8NGW1 331 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 GIMAP7Q8NHV1 300 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 PYROXD1Q8WU10 500 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 MAML1Q92585 1016 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 TBC1D31Q96DN5 1066 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 LBHD1Q9BQE6 289 aaPredicted RBP9.89□□□□□ -0.83
CUX1-206ENST00000437600 NRCAMQ92823 1304 aa9.89□□□□□ -0.83
CUX1-206ENST00000437600 KIF1CO43896 1103 aaKnown RBP9.89□□□□□ -0.83
CUX1-206ENST00000437600 FSBPO95073 299 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms