RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 TULP3O75386 442 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 APEHP13798 732 aaKnown RBP4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 THBS4P35443 961 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 RGS19P49795 217 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 MTHFSP49914 203 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 EVA1CP58658 441 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 CFHR1Q03591 330 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 PLA1AQ53H76 456 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 CC2D1BQ5T0F9 858 aaKnown RBP4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 DAB2IPQ5VWQ8 1189 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 COLCA1Q6ZS62 124 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 RAB11FIP4Q86YS3 637 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 SPARTQ8N0X7 666 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 MAFAQ8NHW3 353 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 PPP2R3CQ969Q6 453 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 MRGPRX1Q96LB2 322 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 MAP3K14Q99558 947 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 P2RX7Q99572 595 aaKnown RBP4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 CGRRF1Q99675 332 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 TRMOQ9BU70 441 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 ASPSCR1Q9BZE9 553 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 GBA2Q9HCG7 927 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 LPAR3Q9UBY5 353 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 MAFFQ9ULX9 164 aa4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 DRG1Q9Y295 367 aaKnown RBP4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 LUC7L2Q9Y383 392 aaKnown RBP4.02□□□□□ -1.77
HMGB1P31-201ENST00000437242 WASHC2CQ9Y4E1 1318 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 LOC105371045A0A1W2PR82 267 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 SMAD6O43541 496 aaKnown RBP4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 CNOT3O75175 753 aaKnown RBP4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 ALDH2P05091 517 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 T-ENOLP0DO92 83 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 AKAP5P24588 427 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 DIO1P49895 249 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 RAB1AP62820 205 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 CCNIQ14094 377 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 KCNB1Q14721 858 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 SEC23BQ15437 767 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 VSTM1Q6UX27 236 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 DLK2Q6UY11 383 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 RANBP10Q6VN20 620 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 ZNF783Q6ZMS7 281 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 GRAMD1CQ8IYS0 662 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 C16orf71Q8IYS4 520 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 LINC01465Q8N7H1 131 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 PLBD2Q8NHP8 589 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 RAPGEF4Q8WZA2 1011 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 ZFYVE19Q96K21 471 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 MS4A7Q9GZW8 240 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 STAP2Q9UGK3 403 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 PROCRQ9UNN8 238 aa4.01□□□□□ -1.77
HMGB1P31-201ENST00000437242 TTC3P53804 2025 aa4□□□□□ -1.77
HMGB1P31-201ENST00000437242 CTSAP10619 480 aa4□□□□□ -1.77
HMGB1P31-201ENST00000437242 VCAM1P19320 739 aa4□□□□□ -1.77
HMGB1P31-201ENST00000437242 PRKAR1BP31321 381 aa4□□□□□ -1.77
HMGB1P31-201ENST00000437242 BCAT1P54687 386 aa4□□□□□ -1.77
HMGB1P31-201ENST00000437242 FGL2Q14314 439 aa4□□□□□ -1.77
HMGB1P31-201ENST00000437242 SLC9C1Q4G0N8 1177 aa4□□□□□ -1.77
HMGB1P31-201ENST00000437242 ZNF549Q6P9A3 640 aa4□□□□□ -1.77
HMGB1P31-201ENST00000437242 MPP5Q8N3R9 675 aa4□□□□□ -1.77
HMGB1P31-201ENST00000437242 MPLKIPQ8TAP9 179 aa4□□□□□ -1.77
HMGB1P31-201ENST00000437242 TRIM54Q9BYV2 358 aa4□□□□□ -1.77
HMGB1P31-201ENST00000437242 USP22Q9UPT9 525 aa4□□□□□ -1.77
HMGB1P31-201ENST00000437242 TMPRSS11DO60235 418 aa3.99□□□□□ -1.77
HMGB1P31-201ENST00000437242 CREB1P16220 341 aa3.99□□□□□ -1.77
HMGB1P31-201ENST00000437242 EPHA3P29320 983 aa3.99□□□□□ -1.77
HMGB1P31-201ENST00000437242 CDKN2AP42771 156 aaKnown RBP3.99□□□□□ -1.77
HMGB1P31-201ENST00000437242 AMPD3Q01432 767 aa3.99□□□□□ -1.77
HMGB1P31-201ENST00000437242 PTCHD3Q3KNS1 767 aa3.99□□□□□ -1.77
HMGB1P31-201ENST00000437242 ZBTB46Q86UZ6 589 aa3.99□□□□□ -1.77
HMGB1P31-201ENST00000437242 OR6B3Q8NGW1 331 aa3.99□□□□□ -1.77
HMGB1P31-201ENST00000437242 DNAJB14Q8TBM8 379 aa3.99□□□□□ -1.77
HMGB1P31-201ENST00000437242 KBTBD7Q8WVZ9 684 aa3.99□□□□□ -1.77
HMGB1P31-201ENST00000437242 HPS3Q969F9 1004 aa3.99□□□□□ -1.77
HMGB1P31-201ENST00000437242 PRSS44E7EML9 344 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 SRGAP2O75044 1071 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 YPEL5P62699 121 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 HSF1Q00613 529 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 CTBP1Q13363 440 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 MTX1Q13505 466 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 RAB32Q13637 225 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 ZNF750Q32MQ0 723 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 UBAP2Q5T6F2 1119 aaKnown RBP3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 ZNF793Q6ZN11 406 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 MMP21Q8N119 569 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 FAM177A1Q8N128 213 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 C1GALT1C1Q96EU7 318 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 CTAGE1Q96RT6 745 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 NUP88Q99567 741 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 VN1R3Q9BXE9 311 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 MGAT4CQ9UBM8 478 aa3.98□□□□□ -1.77
HMGB1P31-201ENST00000437242 FER1L4A9Z1Z3 1794 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 LACTBL1A8MY62 500 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 GTPBP1O00178 669 aaKnown RBP3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 BTN3A1O00481 513 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 SPRY2O43597 315 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 OFD1O75665 1012 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 TGFB3P10600 412 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 238.1 ms