RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 FAM208BQ5VWN6 2430 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 A0A0A0MRY4 1105 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 VPS37CA5D8V6 355 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 TBC1D3BA6NDS4 549 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 KIAA0391O15091 583 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 AP5Z1O43299 807 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 CHRM1P11229 460 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 PTPN1P18031 435 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 RDXP35241 583 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 CACNA2D1P54289 1103 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 RPL6Q02878 288 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 GAD2Q05329 585 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 GFPT1Q06210 699 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 SEMA3BQ13214 749 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 DUOXA1Q1HG43 343 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 SPDYCQ5MJ68 293 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 PIP4P1Q86T03 277 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 LHX6Q9UPM6 363 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 MSRB2Q9Y3D2 182 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 NME7Q9Y5B8 376 aa12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 SRPRBQ9Y5M8 271 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-207ENST00000435083 FRYQ5TBA9 3013 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 CEP192Q8TEP8 1941 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 PLXND1Q9Y4D7 1925 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 E2F8A0AVK6 867 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 CLDN5O00501 218 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 CST3P01034 146 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 YWHAQP27348 245 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 STAT6P42226 847 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 PI4KAP42356 2102 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 WASP42768 502 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 CEBPZQ03701 1054 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 RING1Q06587 406 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 C8orf34Q49A92 452 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 LRSAM1Q6UWE0 723 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 SLC36A4Q6YBV0 504 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 CCDC73Q6ZRK6 1079 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 TRAPPC11Q7Z392 1133 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 WDR49Q8IV35 697 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 CCDC65Q8IXS2 484 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 ZNF513Q8N8E2 541 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 RDH13Q8NBN7 331 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 CEP76Q8TAP6 659 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 ZNF518BQ9C0D4 1074 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 ELOVL4Q9GZR5 314 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 DPEP3Q9H4B8 488 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 TMEM30AQ9NV96 361 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 CHORDC1Q9UHD1 332 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 SH3BP1Q9Y3L3 701 aa12.34□□□□□ -0.43
CHRNA1-207ENST00000435083 FRMD3A2A2Y4 597 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 A8MXQ7 604 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 UPK3BL1B0FP48 263 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 UPK3BL2E5RIL1 263 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 COCHO43405 550 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 OPHN1O60890 802 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 TULP3O75386 442 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 TACC1O75410 805 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 SERPINF2P08697 491 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 DLATP10515 647 aaKnown RBP12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 GABRG2P18507 467 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 TNNI1P19237 187 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 HOXD12P35452 270 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 TNNC1P63316 161 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 C10orf76Q5T2E6 689 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 ERICH6BQ5W0A0 696 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 NUDT18Q6ZVK8 323 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 STXBP4Q6ZWJ1 553 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 TRMT11Q7Z4G4 463 aaKnown RBP12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 NUP93Q8N1F7 819 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 PHTF2Q8N3S3 785 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 CHCHD4Q8N4Q1 142 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 GLIS3Q8NEA6 775 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 PDZD8Q8NEN9 1154 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 OR2I1PQ8NGU4 316 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 FBXO32Q969P5 355 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 OTUB2Q96DC9 234 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 B3GNT5Q9BYG0 378 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 KIAA1586Q9HCI6 787 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 HSPBP1Q9NZL4 362 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 DEC1Q9P2X7 70 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 LAMA1P25391 3075 aa12.33□□□□□ -0.44
CHRNA1-207ENST00000435083 PCNX2A6NKB5 2137 aa12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 H0Y626 953 aa12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 ZBTB24O43167 697 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 RTN3O95197 1032 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 TRIM16O95361 564 aa12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 IRF1P10914 325 aa12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 HOXB2P14652 356 aa12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 FAM193AP78312 1265 aa12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 ZNF33AQ06730 810 aa12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 ACAP1Q15027 740 aa12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 ANO4Q32M45 955 aa12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 WDR72Q3MJ13 1102 aa12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 PREPLQ4J6C6 727 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 HECTD3Q5T447 861 aa12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 PEAR1Q5VY43 1037 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 TMEM25Q86YD3 366 aa12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 BBS7Q8IWZ6 715 aa12.32□□□□□ -0.44
CHRNA1-207ENST00000435083 ETFBKMTQ8IXQ9 262 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms