RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ADGRD1Q6QNK2 874 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 ZNF467Q7Z7K2 595 aaPredicted RBP19.41■□□□□ 0.7
CLK1-205ENST00000434813 RMDN2Q96LZ7 410 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 PAFAH2Q99487 392 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 MAK16Q9BXY0 300 aaKnown RBP19.41■□□□□ 0.7
CLK1-205ENST00000434813 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.41■□□□□ 0.7
CLK1-205ENST00000434813 H3BRB1 525 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 TOMM70O94826 608 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 CA4P22748 312 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 CCDC15Q0P6D6 951 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 GRIK4Q16099 956 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 C15orf59Q2T9L4 293 aaPredicted RBP19.41■□□□□ 0.7
CLK1-205ENST00000434813 C3orf62Q6ZUJ4 267 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 DPP9Q86TI2 863 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 USP6NLQ92738 828 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 PTPN18Q99952 460 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 TUT1Q9H6E5 874 aaKnown RBP19.41■□□□□ 0.7
CLK1-205ENST00000434813 GGT7Q9UJ14 662 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 DERAQ9Y315 318 aa19.41■□□□□ 0.7
CLK1-205ENST00000434813 A0A1W2PPM1 405 aa19.4■□□□□ 0.7
CLK1-205ENST00000434813 SETSIPP0DME0 302 aa19.4■□□□□ 0.7
CLK1-205ENST00000434813 PDK2Q15119 407 aa19.4■□□□□ 0.7
CLK1-205ENST00000434813 PKDCCQ504Y2 493 aa19.4■□□□□ 0.7
CLK1-205ENST00000434813 MARCH8Q5T0T0 291 aa19.4■□□□□ 0.7
CLK1-205ENST00000434813 DARS2Q6PI48 645 aaKnown RBP19.4■□□□□ 0.7
CLK1-205ENST00000434813 OLFML1Q6UWY5 402 aa19.4■□□□□ 0.7
CLK1-205ENST00000434813 NPNTQ6UXI9 565 aa19.4■□□□□ 0.7
CLK1-205ENST00000434813 GPR142Q7Z601 462 aa19.4■□□□□ 0.7
CLK1-205ENST00000434813 FITM2Q8N6M3 262 aa19.4■□□□□ 0.7
CLK1-205ENST00000434813 FBF1Q8TES7 1133 aa19.4■□□□□ 0.7
CLK1-205ENST00000434813 MZB1Q8WU39 189 aa19.4■□□□□ 0.7
CLK1-205ENST00000434813 TEKT4Q8WW24 435 aa19.4■□□□□ 0.7
CLK1-205ENST00000434813 GRID1Q9ULK0 1009 aa19.4■□□□□ 0.7
CLK1-205ENST00000434813 ZWINTO95229 277 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 HOXD8P13378 290 aaPredicted RBP19.39■□□□□ 0.69
CLK1-205ENST00000434813 MGAT5Q09328 741 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 CBLBQ13191 982 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 KCNJ11Q14654 390 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 BBS9Q3SYG4 887 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 CCDC14Q49A88 953 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 RAB6CQ53S08 254 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 FAM47EQ6ZV65 393 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 VSIG1Q86XK7 387 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 MAP7D3Q8IWC1 876 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 C12orf29Q8N999 325 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 MRRFQ96E11 262 aaKnown RBP19.39■□□□□ 0.69
CLK1-205ENST00000434813 RNF157Q96PX1 679 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 RAB6CQ9H0N0 254 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 ECT2Q9H8V3 914 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 PLEKHA5Q9HAU0 1116 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 PIK3R2O00459 728 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 CHADO15335 359 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 ATP2A2P16615 1042 aaKnown RBP19.39■□□□□ 0.69
CLK1-205ENST00000434813 KRT4P19013 534 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 DNAJC3Q13217 504 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 KRT81Q14533 505 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 SLC1A5Q15758 541 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 CDO1Q16878 200 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 PALM2Q8IXS6 379 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 TAB3Q8N5C8 712 aaPredicted RBP19.39■□□□□ 0.69
CLK1-205ENST00000434813 MAGEC3Q8TD91 643 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.39■□□□□ 0.69
CLK1-205ENST00000434813 DCAKDQ8WVC6 231 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 RTP4Q96DX8 246 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 TBCBQ99426 244 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 SLC4A5Q9BY07 1137 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 PHTF1Q9UMS5 762 aa19.39■□□□□ 0.69
CLK1-205ENST00000434813 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.38■□□□□ 0.69
CLK1-205ENST00000434813 TGM2P21980 687 aa19.38■□□□□ 0.69
CLK1-205ENST00000434813 ZNF157P51786 506 aaPredicted RBP19.38■□□□□ 0.69
CLK1-205ENST00000434813 BOLA3Q53S33 107 aa19.38■□□□□ 0.69
CLK1-205ENST00000434813 PPP1R26Q5T8A7 1209 aaPredicted RBP19.38■□□□□ 0.69
CLK1-205ENST00000434813 ZC3H18Q86VM9 953 aaKnown RBP19.38■□□□□ 0.69
CLK1-205ENST00000434813 TTC30AQ86WT1 665 aa19.38■□□□□ 0.69
CLK1-205ENST00000434813 ECHDC2Q86YB7 292 aa19.38■□□□□ 0.69
CLK1-205ENST00000434813 SMC1BQ8NDV3 1235 aa19.38■□□□□ 0.69
CLK1-205ENST00000434813 LRRC8CQ8TDW0 803 aa19.38■□□□□ 0.69
CLK1-205ENST00000434813 SNX27Q96L92 541 aa19.38■□□□□ 0.69
CLK1-205ENST00000434813 CFAP69A5D8W1 941 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 EDF1O60869 148 aaKnown RBP19.37■□□□□ 0.69
CLK1-205ENST00000434813 GRAP2O75791 330 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 RGS7P49802 495 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 NRLP54845 237 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 HHATQ5VTY9 493 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 PMF1Q6P1K2 205 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 APBB1IPQ7Z5R6 666 aaPredicted RBP19.37■□□□□ 0.69
CLK1-205ENST00000434813 PLEKHH3Q7Z736 793 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 TMEM110Q86TL2 294 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 SESTD1Q86VW0 696 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 SPOCK2Q92563 424 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 MRPL45Q9BRJ2 306 aaKnown RBP19.37■□□□□ 0.69
CLK1-205ENST00000434813 CD248Q9HCU0 757 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 PAK5Q9P286 719 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 CHMP2BQ9UQN3 213 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 H7C0C1 242 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 SPAG6O75602 509 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 NPTXRO95502 500 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 SNAI1O95863 264 aaPredicted RBP19.37■□□□□ 0.69
CLK1-205ENST00000434813 MMP3P08254 477 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 IL4RP24394 825 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms