RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 SLC6A3Q01959 620 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 PREPLQ4J6C6 727 aaPredicted RBP10.87□□□□□ -0.67
CD44-210ENST00000434472 WLSQ5T9L3 541 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 MAP1SQ66K74 1059 aaPredicted RBP10.87□□□□□ -0.67
CD44-210ENST00000434472 LVRNQ6Q4G3 990 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 DLK2Q6UY11 383 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 FAM47EQ6ZV65 393 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 USP50Q70EL3 339 aaPredicted RBP10.87□□□□□ -0.67
CD44-210ENST00000434472 UNC93AQ86WB7 457 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 ECHDC2Q86YB7 292 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 CDKL3Q8IVW4 592 aaPredicted RBP10.87□□□□□ -0.67
CD44-210ENST00000434472 FITM2Q8N6M3 262 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 GPRC5AQ8NFJ5 357 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 DCAKDQ8WVC6 231 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 PEBP4Q96S96 227 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 VPS11Q9H270 941 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 NOD2Q9HC29 1040 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 CD248Q9HCU0 757 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 ARHGEF3Q9NR81 526 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.87□□□□□ -0.67
CD44-210ENST00000434472 HESX1Q9UBX0 185 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 A0A1W2PPM1 405 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 BCLAF3A2AJT9 711 aaKnown RBP10.87□□□□□ -0.67
CD44-210ENST00000434472 RRN3P2A6NIE6 340 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 E5RJQ4 531 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 MDM4O15151 490 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 STRNO43815 780 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 HNRNPCL1O60812 293 aaKnown RBP10.87□□□□□ -0.67
CD44-210ENST00000434472 VTNP04004 478 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 CYP2C8P10632 490 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 CYP3A5P20815 502 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 BCAR1P56945 870 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 ZNF200P98182 395 aaPredicted RBP10.87□□□□□ -0.67
CD44-210ENST00000434472 DNAJC3Q13217 504 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 KCNJ11Q14654 390 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 PCBP1Q15365 356 aaKnown RBP eCLIP10.87□□□□□ -0.67
CD44-210ENST00000434472 SLC1A5Q15758 541 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 CCDC14Q49A88 953 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 MSS51Q4VC12 460 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 LGSNQ5TDP6 509 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 DPH6Q7L8W6 267 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 TMEM110Q86TL2 294 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 PNMA8AQ86V59 439 aaPredicted RBP10.87□□□□□ -0.67
CD44-210ENST00000434472 LRRC52Q8N7C0 313 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 BEST2Q8NFU1 509 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 ZNF75CPQ92670 426 aaPredicted RBP10.87□□□□□ -0.67
CD44-210ENST00000434472 FAF2Q96CS3 445 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 LRRC39Q96DD0 335 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 ZBTB10Q96DT7 871 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 MRRFQ96E11 262 aaKnown RBP10.87□□□□□ -0.67
CD44-210ENST00000434472 RMDN2Q96LZ7 410 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 SLC4A5Q9BY07 1137 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 C10orf88Q9H8K7 445 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 PRDM16Q9HAZ2 1276 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 CYLDQ9NQC7 956 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 BAIAP2L1Q9UHR4 511 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 SLC45A1Q9Y2W3 748 aa10.87□□□□□ -0.67
CD44-210ENST00000434472 TCRBV7S3A2A0A539 114 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 UNCXA6NJT0 531 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 IGF2BP3O00425 579 aaKnown RBP eCLIP10.86□□□□□ -0.67
CD44-210ENST00000434472 TRDMT1O14717 391 aaKnown RBP10.86□□□□□ -0.67
CD44-210ENST00000434472 BANF1O75531 89 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 FAM155BO75949 473 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 ECM2O94769 699 aaPredicted RBP10.86□□□□□ -0.67
CD44-210ENST00000434472 UNC5CO95185 931 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 PFKMP08237 780 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 INHBAP08476 426 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 ELK3P41970 407 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 MAGEA6P43360 314 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 PTPN9P43378 593 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 RASSF2P50749 326 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 MMRN1Q13201 1228 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 TAF5Q15542 800 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 GRIK4Q16099 956 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 PARP6Q2NL67 630 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 PKDCCQ504Y2 493 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 ARHGAP17Q68EM7 881 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 SLC9A4Q6AI14 798 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 SCYL2Q6P3W7 929 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 OLFML1Q6UWY5 402 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 MAMDC4Q6UXC1 1216 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 CYP4V2Q6ZWL3 525 aaPredicted RBP10.86□□□□□ -0.67
CD44-210ENST00000434472 ASRGL1Q7L266 308 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 ARCQ7LC44 396 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 AGGF1Q8N302 714 aaeCLIP10.86□□□□□ -0.67
CD44-210ENST00000434472 BANPQ8N9N5 519 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 MZB1Q8WU39 189 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 SLC44A1Q8WWI5 657 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 TSPAN18Q96SJ8 248 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 ZNF670Q9BS34 389 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 C16orf70Q9BSU1 422 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 TUBB6Q9BUF5 446 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 GCOM2Q9BZD3 368 aaPredicted RBP10.86□□□□□ -0.67
CD44-210ENST00000434472 KLC2Q9H0B6 622 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 KIF9Q9HAQ2 790 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 PCDH18Q9HCL0 1135 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.86□□□□□ -0.67
CD44-210ENST00000434472 GGT7Q9UJ14 662 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 TEX264Q9Y6I9 313 aa10.86□□□□□ -0.67
CD44-210ENST00000434472 H3BRB1 525 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms