RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 COPS2P61201 443 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 DEFB103AP81534 67 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 MRPL58Q14197 206 aaKnown RBP11.07□□□□□ -0.64
NEFM-202ENST00000433454 BRD3Q15059 726 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 SMTNL2Q2TAL5 461 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 ATP13A4Q4VNC1 1196 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 TXNRD3NBQ6F5E7 133 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 GPRIN1Q7Z2K8 1008 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 FAM172AQ8WUF8 416 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
NEFM-202ENST00000433454 FUBP3Q96I24 572 aaKnown RBP eCLIP11.07□□□□□ -0.64
NEFM-202ENST00000433454 SLITRK1Q96PX8 696 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 OSBPL8Q9BZF1 889 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 ULBP1Q9BZM6 244 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 PRDM10Q9NQV6 1147 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.07□□□□□ -0.64
NEFM-202ENST00000433454 PRKAG2Q9UGJ0 569 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 PCSK1NQ9UHG2 260 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 TCRBV7S2A1N4TA0A589 114 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 CCDC151A5D8V7 595 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 HHLA1C9JL84 531 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 RAD51CO43502 376 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 PHF2O75151 1096 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 DAB1O75553 588 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 OR4Q2P0C623 313 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 EN2P19622 333 aaPredicted RBP11.07□□□□□ -0.64
NEFM-202ENST00000433454 CHRNA3P32297 505 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 MATKP42679 507 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 NDUFV1P49821 464 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 VSNL1P62760 191 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 YWHAZP63104 245 aaKnown RBP11.07□□□□□ -0.64
NEFM-202ENST00000433454 MRPS25P82663 173 aaKnown RBP11.07□□□□□ -0.64
NEFM-202ENST00000433454 LLGL1Q15334 1064 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 KCNT1Q5JUK3 1230 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 SH3PXD2AQ5TCZ1 1133 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 ANKS3Q6ZW76 656 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 MAATS1Q7Z4T9 603 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 PRELID2Q8N945 189 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 CCDC26Q8TAB7 109 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 BCL7CQ8WUZ0 217 aaPredicted RBP11.07□□□□□ -0.64
NEFM-202ENST00000433454 ACSF2Q96CM8 615 aaPredicted RBP11.07□□□□□ -0.64
NEFM-202ENST00000433454 B3GALT6Q96L58 329 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 TTPALQ9BTX7 342 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 CWH43Q9H720 699 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 IL23AQ9NPF7 189 aa11.07□□□□□ -0.64
NEFM-202ENST00000433454 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.07□□□□□ -0.64
NEFM-202ENST00000433454 ABI2Q9NYB9 513 aaPredicted RBP11.07□□□□□ -0.64
NEFM-202ENST00000433454 PI4K2BG5E9Z4 385 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 H7C4K7 107 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 TRUB2O95900 331 aaKnown RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 ZBED1O96006 694 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 ACRP10323 421 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 PTPN7P35236 360 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 RABGGTBP53611 331 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 DAOAP59103 153 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 SLC7A5Q01650 507 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 RTP2Q5QGT7 225 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 SPOUT1Q5T280 376 aaKnown RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 FAM117BQ6P1L5 589 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 SPOCD1Q6ZMY3 1216 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 HDAC7Q8WUI4 952 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 RAPGEF5Q92565 580 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 NDRG1Q92597 394 aaKnown RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 ZNF689Q96CS4 500 aaPredicted RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 C11orf84Q9BUA3 381 aaPredicted RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 DDX23Q9BUQ8 820 aaKnown RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 OXCT2Q9BYC2 517 aaPredicted RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 RC3H2Q9HBD1 1191 aaKnown RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 POPDC2Q9HBU9 364 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 AMACRQ9UHK6 382 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 DMGDHQ9UI17 866 aaKnown RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 ERLIN1O75477 346 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 HEXIM1O94992 359 aaKnown RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 USP17L7P0C7H9 530 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 RARAP10276 462 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 GRIK1P39086 918 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 CLCN6P51797 869 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 KLF1Q13351 362 aaPredicted RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 SIX1Q15475 284 aaPredicted RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 CYP1B1Q16678 543 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 TFDP3Q5H9I0 405 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 VSTM1Q6UX27 236 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 MFSD7Q6UXD7 560 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 CMTR2Q8IYT2 770 aaKnown RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 ZDHHC14Q8IZN3 488 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 DEFB106AQ8N104 65 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 C12orf50Q8NA57 414 aaPredicted RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 CENPIQ92674 756 aaPredicted RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 MAGOHBQ96A72 148 aaKnown RBP11.06□□□□□ -0.64
NEFM-202ENST00000433454 RUNDC3BQ96NL0 473 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 SLC2A13Q96QE2 648 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 TBCBQ99426 244 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 HEMGNQ9BXL5 484 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 STAP1Q9ULZ2 295 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 PCDHB5Q9Y5E4 795 aa11.06□□□□□ -0.64
NEFM-202ENST00000433454 CARNS1A5YM72 827 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 ZMYND10O75800 440 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 TJP3O95049 919 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 CPB1P15086 417 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 CYP2F1P24903 491 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms