RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 TEX13BQ9BXU2 312 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 AVENQ9NQS1 362 aaPredicted RBP11.8□□□□□ -0.52
SEC16A-206ENST00000431893 TMCC3Q9ULS5 477 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 GLRA3O75311 464 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 H2AFYO75367 372 aaKnown RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 FAM86B2P0C5J1 330 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 C6orf222P0C671 652 aaPredicted RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 RXRBP28702 533 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 NPEPPSP55786 919 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 CRYMQ14894 314 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 TSC22D1Q15714 1073 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 RNFT2Q96EX2 444 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 FAM84BQ96KN1 310 aaPredicted RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 MARK4Q96L34 752 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 RIBC2Q9H4K1 309 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 RNF181Q9P0P0 153 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 WDR35Q9P2L0 1181 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 TRPC4Q9UBN4 977 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 DCDC2Q9UHG0 476 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 DUSP12Q9UNI6 340 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 PTGES3LE9PB15 166 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 CHRNA5P30532 468 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 STX5Q13190 355 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 CDH18Q13634 790 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 TRIQKQ629K1 86 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 RIBC1Q8N443 379 aaPredicted RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 POU5F2Q8N7G0 328 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 MAN1C1Q9NR34 630 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 CYP39A1Q9NYL5 469 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 ZNF521Q96K83 1311 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 TSPAN3O60637 253 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 RPS6KA5O75582 802 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 RAG1P15918 1043 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 SV2CQ496J9 727 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 PAN2Q504Q3 1202 aaKnown RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 NAPEPLDQ6IQ20 393 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 IZUMO1Q8IYV9 350 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 LRRC39Q96DD0 335 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 RUSC1Q9BVN2 902 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 RMND5AQ9H871 391 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 POLR1BQ9H9Y6 1135 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 EFCAB1Q9HAE3 211 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 GPRC5CQ9NQ84 441 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 ZNF624Q9P2J8 865 aaPredicted RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 SLC25A13Q9UJS0 675 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 SLC9A8Q9Y2E8 581 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 USP6P35125 1406 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 TK2O00142 265 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 TNPO2O14787 897 aaKnown RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 STX7O15400 261 aaKnown RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 EXTL3O43909 919 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 CYP19A1P11511 503 aaPredicted RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 YWHAZP63104 245 aaKnown RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 POLD3Q15054 466 aaPredicted RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 CLEC4GQ6UXB4 293 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 CLVS1Q8IUQ0 354 aaPredicted RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 CDC42EP4Q9H3Q1 356 aaKnown RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 DDIT4Q9NX09 232 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 ARMCX1Q9P291 453 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 RRN3P2A6NIE6 340 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 PSMD11O00231 422 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 HS6ST1O60243 411 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 TPH1P17752 444 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 WEE1P30291 646 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 EXOSC10Q01780 885 aaKnown RBP11.79□□□□□ -0.52
SEC16A-206ENST00000431893 MIB1Q86YT6 1006 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 ZSWIM1Q9BR11 485 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 STK39Q9UEW8 545 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 TAF6LQ9Y6J9 622 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 CAPN6Q9Y6Q1 641 aa11.79□□□□□ -0.52
SEC16A-206ENST00000431893 AATKQ6ZMQ8 1374 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 EFHC1Q5JVL4 640 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 ZNF618Q5T7W0 954 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 TMEM26Q6ZUK4 368 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 ACOT1Q86TX2 421 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 GATAD2AQ86YP4 633 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 KATNAL1Q9BW62 490 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 DGCR6LQ9BY27 220 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 OSGEPQ9NPF4 335 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 IL1RAPL1Q9NZN1 696 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 TMEM94Q12767 1356 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 PSTPIP1O43586 416 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 SLC2A4P14672 509 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 NUP107P57740 925 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 HERVK_113P62684 666 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 ARF5P84085 180 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 KYAT1Q16773 422 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 CES3Q6UWW8 571 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 NEK10Q6ZWH5 1172 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 CACTIN-AS1Q8N1I8 211 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 STKLD1Q8NE28 680 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 KIF2CQ99661 725 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 MTMR12Q9C0I1 747 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 KRCC1Q9NPI7 259 aaPredicted RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 FOXP2O15409 715 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 CCNT2O60583 730 aaKnown RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 PON1P27169 355 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 HALP42357 657 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 PDIA5Q14554 519 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms