RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 PPP3CCP48454 512 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 ZNF75DP51815 510 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 ZBED6P86452 979 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 CYP4F8P98187 520 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 PLCB2Q00722 1185 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 FMO1Q01740 532 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 IFRD2Q12894 506 aaPredicted RBP15.16■□□□□ 0.02
CSTF3-202ENST00000431742 PDCLQ13371 301 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 TRIM14Q14142 442 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 SNX30Q5VWJ9 437 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 BHLHA9Q7RTU4 235 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 PASD1Q8IV76 773 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 ZDHHC14Q8IZN3 488 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 PDZD8Q8NEN9 1154 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 SYN2Q92777 582 aaPredicted RBP15.16■□□□□ 0.02
CSTF3-202ENST00000431742 ACSF2Q96CM8 615 aaPredicted RBP15.16■□□□□ 0.02
CSTF3-202ENST00000431742 HSFY1Q96LI6 401 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 SLITRK1Q96PX8 696 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 SLC4A5Q9BY07 1137 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 ATXN3LQ9H3M9 355 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 CYLDQ9NQC7 956 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 GMIPQ9P107 970 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 ZMYM5Q9UJ78 669 aa15.16■□□□□ 0.02
CSTF3-202ENST00000431742 VCANP13611 3396 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 COL4A2P08572 1712 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 ZNF840PA6NDX5 716 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 LSM8O95777 96 aaKnown RBP15.15■□□□□ 0.02
CSTF3-202ENST00000431742 MMEP08473 750 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 CCDC172P0C7W6 258 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 DDX6P26196 483 aaKnown RBP eCLIP15.15■□□□□ 0.02
CSTF3-202ENST00000431742 WEE1P30291 646 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 GBP2P32456 591 aaPredicted RBP15.15■□□□□ 0.02
CSTF3-202ENST00000431742 RGS7P49802 495 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 TKTL1P51854 596 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 ARID5AQ03989 594 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 ADIGQ0VDE8 80 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 TBX2Q13207 712 aaPredicted RBP15.15■□□□□ 0.02
CSTF3-202ENST00000431742 ARID5BQ14865 1188 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 SFMBT2Q5VUG0 894 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 TAF3Q5VWG9 929 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 PM20D1Q6GTS8 502 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 MON1AQ86VX9 555 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 SCML4Q8N228 414 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 C1orf131Q8NDD1 294 aaKnown RBP15.15■□□□□ 0.02
CSTF3-202ENST00000431742 MRPS31Q92665 395 aaKnown RBP15.15■□□□□ 0.02
CSTF3-202ENST00000431742 RPGRIP1Q96KN7 1286 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 ZSWIM3Q96MP5 696 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 NUCKS1Q9H1E3 243 aaKnown RBP15.15■□□□□ 0.02
CSTF3-202ENST00000431742 LRRC4Q9HBW1 653 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 TRPM5Q9NZQ8 1165 aa15.15■□□□□ 0.02
CSTF3-202ENST00000431742 OLFM2O95897 454 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 OAS1P00973 400 aaKnown RBP15.14■□□□□ 0.01
CSTF3-202ENST00000431742 SP100P23497 879 aaPredicted RBP15.14■□□□□ 0.01
CSTF3-202ENST00000431742 CASP14P31944 242 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 PGFP49763 221 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 NOMO3P69849 1222 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 ASIC2Q16515 512 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 ARHGAP15Q53QZ3 475 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 GPR158Q5T848 1215 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 HGSNATQ68CP4 663 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 SCD5Q86SK9 330 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 TMEM110Q86TL2 294 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 PLCD3Q8N3E9 789 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 MCRS1Q96EZ8 462 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 CPXM1Q96SM3 734 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 ULBP1Q9BZM6 244 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 TASP1Q9H6P5 420 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 NMUR1Q9HB89 426 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 TRPV4Q9HBA0 871 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 CNGB3Q9NQW8 809 aa15.14■□□□□ 0.01
CSTF3-202ENST00000431742 LUC7L2Q9Y383 392 aaKnown RBP15.14■□□□□ 0.01
CSTF3-202ENST00000431742 C2orf78A6NCI8 922 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 E5RJQ4 531 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 ANHXE9PGG2 379 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 ZBED1O96006 694 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 CYP1A1P04798 512 aaPredicted RBP15.13■□□□□ 0.01
CSTF3-202ENST00000431742 USP17L7P0C7H9 530 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 PFKLP17858 780 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 FCARP24071 287 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 HNRNPH3P31942 346 aaKnown RBP15.13■□□□□ 0.01
CSTF3-202ENST00000431742 ACADSBP45954 432 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 PSEN1P49768 467 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 TUBP50607 506 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 DAOAP59103 153 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 HTR4Q13639 388 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 PTPN20Q4JDL3 420 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 FAM78AQ5JUQ0 283 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 TXNDC8Q6A555 127 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 TRIM72Q6ZMU5 477 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 SIX6OS1Q8N1H7 587 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 ZNF276Q8N554 614 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 TMEM35BQ8NCS4 154 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 ZNF397Q8NF99 534 aaPredicted RBP15.13■□□□□ 0.01
CSTF3-202ENST00000431742 ZSCAN18Q8TBC5 510 aaPredicted RBP15.13■□□□□ 0.01
CSTF3-202ENST00000431742 ADAMTS19Q8TE59 1207 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 CPLX3Q8WVH0 158 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 IRGQQ8WZA9 623 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 ASB16Q96NS5 453 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 PCDHB18PQ96TA0 734 aa15.13■□□□□ 0.01
CSTF3-202ENST00000431742 DNAJC7Q99615 494 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms