RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TMEM30AQ9NV96 361 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 PACSIN2Q9UNF0 486 aaPredicted RBP19.15■□□□□ 0.66
HMGN1-206ENST00000431390 PCDHB5Q9Y5E4 795 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 HHLA1C9JL84 531 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 SPOPO43791 374 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 TLL1O43897 1013 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 FBXO21O94952 628 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 LCP1P13796 627 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 RFC1P35251 1148 aaPredicted RBP19.15■□□□□ 0.66
HMGN1-206ENST00000431390 MAGEA11P43364 429 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 CACNA2D1P54289 1103 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 DSG1Q02413 1049 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 PIGHQ14442 188 aaPredicted RBP19.15■□□□□ 0.66
HMGN1-206ENST00000431390 PSMD5Q16401 504 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 SLC8B1Q6J4K2 584 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 KIAA1841Q6NSI8 718 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 VSTM1Q6UX27 236 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 SLC26A9Q7LBE3 791 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 ARCQ7LC44 396 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 SCUBE3Q8IX30 993 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 SPPL2BQ8TCT7 592 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 RIN2Q8WYP3 895 aaPredicted RBP19.15■□□□□ 0.66
HMGN1-206ENST00000431390 OSBPL9Q96SU4 736 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 KCNK16Q96T55 309 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 RHOBTB2Q9BYZ6 727 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 TMEM59LQ9UK28 342 aa19.15■□□□□ 0.66
HMGN1-206ENST00000431390 CES2O00748 559 aa19.14■□□□□ 0.65
HMGN1-206ENST00000431390 CPB1P15086 417 aa19.14■□□□□ 0.65
HMGN1-206ENST00000431390 CTNNA2P26232 953 aa19.14■□□□□ 0.65
HMGN1-206ENST00000431390 GLUD2P49448 558 aa19.14■□□□□ 0.65
HMGN1-206ENST00000431390 KRT17Q04695 432 aa19.14■□□□□ 0.65
HMGN1-206ENST00000431390 ADIGQ0VDE8 80 aa19.14■□□□□ 0.65
HMGN1-206ENST00000431390 ACAP1Q15027 740 aa19.14■□□□□ 0.65
HMGN1-206ENST00000431390 PRSS55Q6UWB4 352 aaPredicted RBP19.14■□□□□ 0.65
HMGN1-206ENST00000431390 SIX6OS1Q8N1H7 587 aa19.14■□□□□ 0.65
HMGN1-206ENST00000431390 JOSD2Q8TAC2 188 aa19.14■□□□□ 0.65
HMGN1-206ENST00000431390 CD101Q93033 1021 aa19.14■□□□□ 0.65
HMGN1-206ENST00000431390 PIWIL1Q96J94 861 aaKnown RBP19.14■□□□□ 0.65
HMGN1-206ENST00000431390 CNGB3Q9NQW8 809 aa19.14■□□□□ 0.65
HMGN1-206ENST00000431390 ABI2Q9NYB9 513 aaPredicted RBP19.14■□□□□ 0.65
HMGN1-206ENST00000431390 TKTL1P51854 596 aa19.13■□□□□ 0.65
HMGN1-206ENST00000431390 OGDHQ02218 1023 aa19.13■□□□□ 0.65
HMGN1-206ENST00000431390 ADCY1Q08828 1119 aa19.13■□□□□ 0.65
HMGN1-206ENST00000431390 ZNF252P-AS1Q0IIN9 211 aa19.13■□□□□ 0.65
HMGN1-206ENST00000431390 WHAMMP3Q1A5X7 153 aa19.13■□□□□ 0.65
HMGN1-206ENST00000431390 EFHC1Q5JVL4 640 aa19.13■□□□□ 0.65
HMGN1-206ENST00000431390 RSPO2Q6UXX9 243 aaPredicted RBP19.13■□□□□ 0.65
HMGN1-206ENST00000431390 SCML4Q8N228 414 aa19.13■□□□□ 0.65
HMGN1-206ENST00000431390 UBL4BQ8N7F7 174 aa19.13■□□□□ 0.65
HMGN1-206ENST00000431390 FBXO22Q8NEZ5 403 aa19.13■□□□□ 0.65
HMGN1-206ENST00000431390 HLA-CQ95604 372 aa19.13■□□□□ 0.65
HMGN1-206ENST00000431390 ASNSD1Q9NWL6 643 aa19.13■□□□□ 0.65
HMGN1-206ENST00000431390 CCDC66A2RUB6 948 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 LCHNA4D1U4 455 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 MTMR11A4FU01 709 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 C2CD4BA6NLJ0 364 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 F8VP50 259 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 TRIM66O15016 1216 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 DDX3YO15523 660 aaKnown RBP19.12■□□□□ 0.65
HMGN1-206ENST00000431390 SART1O43290 800 aaKnown RBP19.12■□□□□ 0.65
HMGN1-206ENST00000431390 LPXNO60711 386 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 URODP06132 367 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 GLI1P08151 1106 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 GPD1P21695 349 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 CYP2F1P24903 491 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 CTNNA1P35221 906 aaKnown RBP19.12■□□□□ 0.65
HMGN1-206ENST00000431390 CDR1P51861 262 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 PTPROQ16827 1216 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 KHSRPQ92945 711 aaKnown RBP eCLIP19.12■□□□□ 0.651e-7■■□□□ 13.3
HMGN1-206ENST00000431390 PBKQ96KB5 322 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 C8orf48Q96LL4 319 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 LRFN3Q9BTN0 628 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 RWDD3Q9Y3V2 267 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 CDY1Q9Y6F8 540 aa19.12■□□□□ 0.65
HMGN1-206ENST00000431390 DPYSL4O14531 572 aa19.11■□□□□ 0.65
HMGN1-206ENST00000431390 FGF18O76093 207 aa19.11■□□□□ 0.65
HMGN1-206ENST00000431390 PSMA2P25787 234 aa19.11■□□□□ 0.65
HMGN1-206ENST00000431390 GRIK1P39086 918 aa19.11■□□□□ 0.65
HMGN1-206ENST00000431390 ZNF143P52747 638 aaPredicted RBP19.11■□□□□ 0.65
HMGN1-206ENST00000431390 GPRIN1Q7Z2K8 1008 aa19.11■□□□□ 0.65
HMGN1-206ENST00000431390 EMC1Q8N766 993 aa19.11■□□□□ 0.65
HMGN1-206ENST00000431390 GDPD5Q8WTR4 605 aa19.11■□□□□ 0.65
HMGN1-206ENST00000431390 CLEC4CQ8WTT0 213 aa19.11■□□□□ 0.65
HMGN1-206ENST00000431390 RNF14Q9UBS8 474 aa19.11■□□□□ 0.65
HMGN1-206ENST00000431390 PCDHA3Q9Y5H8 950 aa19.11■□□□□ 0.65
HMGN1-206ENST00000431390 KCNK3O14649 394 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 RIOK3O14730 519 aaKnown RBP19.1■□□□□ 0.65
HMGN1-206ENST00000431390 HSF2BPO75031 334 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 SRGAP2O75044 1071 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 ARPP19P56211 112 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 ROR1Q01973 937 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 CREMQ03060 361 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 CPNE8Q86YQ8 564 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 VPS52Q8N1B4 723 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 RXFP2Q8WXD0 754 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 IRGQQ8WZA9 623 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 PGLYRP2Q96PD5 576 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 CNPY3Q9BT09 278 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 ULBP1Q9BZM6 244 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 CARD9Q9H257 536 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms