RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SOWAHDA6NJG2 315 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 TMCO5BA8MYB1 307 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 ARHGAP6O43182 974 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 RTN2O75298 545 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 ZBED1O96006 694 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 ERBB2P04626 1255 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 FAM228BP0C875 321 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 HMGA1P17096 107 aaKnown RBP11.57□□□□□ -0.56
CHD4-202ENST00000430771 PTPN2P17706 415 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 MMP8P22894 467 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 SCNN1AP37088 669 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 GABRB2P47870 512 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 PSEN1P49768 467 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 EPHA5P54756 1037 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 GFPT1Q06210 699 aaPredicted RBP11.57□□□□□ -0.56
CHD4-202ENST00000430771 MTMR3Q13615 1198 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 SPA17Q15506 151 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 CCDC85BQ15834 202 aaPredicted RBP11.57□□□□□ -0.56
CHD4-202ENST00000430771 ASTE1Q2TB18 679 aaPredicted RBP11.57□□□□□ -0.56
CHD4-202ENST00000430771 PABPC1LQ4VXU2 614 aaKnown RBP11.57□□□□□ -0.56
CHD4-202ENST00000430771 CCDC122Q5T0U0 273 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 C10orf76Q5T2E6 689 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 CYP4A22Q5TCH4 519 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 ALKBH5Q6P6C2 394 aaKnown RBP11.57□□□□□ -0.56
CHD4-202ENST00000430771 SYCE2Q6PIF2 218 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 MON1BQ7L1V2 547 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 GPR149Q86SP6 731 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 TMEM110Q86TL2 294 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 TMC8Q8IU68 726 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 LRRC8AQ8IWT6 810 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 TXLNBQ8N3L3 684 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 WDTC1Q8N5D0 677 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 STKLD1Q8NE28 680 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 SLC30A5Q8TAD4 765 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 ZNF707Q96C28 371 aaPredicted RBP11.57□□□□□ -0.56
CHD4-202ENST00000430771 VCPIP1Q96JH7 1222 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 RIPOR3Q96MK2 946 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 NECTIN4Q96NY8 510 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 PPP1R9BQ96SB3 815 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 CORO1BQ9BR76 489 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 ADAM7Q9H2U9 754 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 AVENQ9NQS1 362 aaPredicted RBP11.57□□□□□ -0.56
CHD4-202ENST00000430771 TLR8Q9NR97 1041 aaKnown RBP11.57□□□□□ -0.56
CHD4-202ENST00000430771 IL37Q9NZH6 218 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 ADAM22Q9P0K1 906 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 CLEC1BQ9P126 229 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 CD207Q9UJ71 328 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 ZMYM5Q9UJ78 669 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 SCML2Q9UQR0 700 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 USP3Q9Y6I4 520 aa11.57□□□□□ -0.56
CHD4-202ENST00000430771 DENND4CQ5VZ89 1909 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 EIF3CLB5ME19 914 aaKnown RBP11.56□□□□□ -0.56
CHD4-202ENST00000430771 ZNF197O14709 1029 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 NDUFA10O95299 355 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 RHOP08100 348 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 USP17L7P0C7H9 530 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 MYL4P12829 197 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 DDX6P26196 483 aaKnown RBP eCLIP11.56□□□□□ -0.56
CHD4-202ENST00000430771 GABRR2P28476 465 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 MTHFRP42898 656 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 DAOAP59103 153 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 USP46P62068 366 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 MRPS5P82675 430 aaKnown RBP11.56□□□□□ -0.56
CHD4-202ENST00000430771 TAF10Q12962 218 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 SMAD4Q13485 552 aaKnown RBP11.56□□□□□ -0.56
CHD4-202ENST00000430771 ARHGAP15Q53QZ3 475 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 ATAT1Q5SQI0 421 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 OR6B2Q6IFH4 312 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 FAM183BPQ6ZVS7 135 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 TADA2BQ86TJ2 420 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 TMEM139Q8IV31 216 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 MCOLN2Q8IZK6 566 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 C12orf76Q8N812 135 aaPredicted RBP11.56□□□□□ -0.56
CHD4-202ENST00000430771 SMRP1Q8NCR6 262 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 C3orf20Q8ND61 904 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 MAFAQ8NHW3 353 aaPredicted RBP11.56□□□□□ -0.56
CHD4-202ENST00000430771 SCAMP5Q8TAC9 235 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 PPM1EQ8WY54 764 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 MRPS31Q92665 395 aaKnown RBP11.56□□□□□ -0.56
CHD4-202ENST00000430771 FAM149B1Q96BN6 582 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 ZNF653Q96CK0 615 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 MSLNLQ96KJ4 702 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 CDK5RAP1Q96SZ6 601 aaKnown RBP11.56□□□□□ -0.56
CHD4-202ENST00000430771 EIF3CQ99613 913 aaKnown RBP11.56□□□□□ -0.56
CHD4-202ENST00000430771 ISCUQ9H1K1 167 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 SPTLC3Q9NUV7 552 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 ASNSD1Q9NWL6 643 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 TAS2R14Q9NYV8 317 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 TRPM5Q9NZQ8 1165 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 GMIPQ9P107 970 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 DNMT3BQ9UBC3 853 aaKnown RBP11.56□□□□□ -0.56
CHD4-202ENST00000430771 NENFQ9UMX5 172 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 COG5Q9UP83 839 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 SCINQ9Y6U3 715 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 CLUHO75153 1309 aa11.56□□□□□ -0.56
CHD4-202ENST00000430771 NUP210Q8TEM1 1887 aaPredicted RBP11.55□□□□□ -0.56
CHD4-202ENST00000430771 ANKRD62A6NC57 917 aa11.55□□□□□ -0.56
CHD4-202ENST00000430771 PIK3R2O00459 728 aa11.55□□□□□ -0.56
CHD4-202ENST00000430771 PAPSS1O43252 624 aaPredicted RBP11.55□□□□□ -0.56
CHD4-202ENST00000430771 HSF2BPO75031 334 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms