RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 PSMD11O00231 422 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 TP73O15350 636 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 NUAK1O60285 661 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 GPC4O75487 556 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 GABBR2O75899 941 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 H6PDO95479 791 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 TGFB3P10600 412 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 FGFR1P11362 822 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 RAG1P15918 1043 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 CA4P22748 312 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 RPA3P35244 121 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 GNL1P36915 607 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 CASP5P51878 434 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 GJA9P57773 515 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 STX1BP61266 288 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 PTK2Q05397 1052 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLC1A5Q15758 541 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 IL17AQ16552 155 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 RABGAP1LQ5R372 815 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 CYP4A22Q5TCH4 519 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 CNNM4Q6P4Q7 775 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 PGM2L1Q6PCE3 622 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 CCBE1Q6UXH8 406 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 KBTBD6Q86V97 674 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 RAVER1Q8IY67 606 aaKnown RBP9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 CCDC105Q8IYK2 499 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 ELMOD2Q8IZ81 293 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 PQLC1Q8N2U9 271 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLC25A41Q8N5S1 370 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 FLAD1Q8NFF5 587 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 CDKL2Q92772 493 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLCO2A1Q92959 643 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 PRR11Q96HE9 360 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 RNF26Q9BY78 433 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 DCLK3Q9C098 648 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 CNNM1Q9NRU3 951 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 NINJ2Q9NZG7 142 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 GMIPQ9P107 970 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 EBF1Q9UH73 591 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 DAPK2Q9UIK4 370 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 PSMD13Q9UNM6 376 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 TACC3Q9Y6A5 838 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 BCORQ6W2J9 1755 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 CAPNS1P04632 268 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 TBXAS1P24557 533 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 PKLRP30613 574 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 NUDT1P36639 197 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 ADCY8P40145 1251 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 BTDP43251 543 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 TPTEP56180 551 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 MCCD1P59942 119 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 TAGLNQ01995 201 aaKnown RBP9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 PPATQ06203 517 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 COX10Q12887 443 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 UBE3CQ15386 1083 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 BBS9Q3SYG4 887 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 EARS2Q5JPH6 523 aaKnown RBP9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 TTC27Q6P3X3 843 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 XKR5Q6UX68 686 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 IRF2BP2Q7Z5L9 587 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 GALNT7Q86SF2 657 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 PLPP6Q8IY26 295 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 KIAA2013Q8IYS2 634 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF276Q8N554 614 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 GALNT6Q8NCL4 622 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 FBXO27Q8NI29 283 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 TNFRSF25Q93038 417 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 MRPL9Q9BYD2 267 aaKnown RBP9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 NMUR2Q9GZQ4 415 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 RMND5AQ9H871 391 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 PPCSQ9HAB8 311 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 STMN3Q9NZ72 180 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 MOCS1Q9NZB8 636 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 GNEQ9Y223 722 aaKnown RBP9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 PCDHGA8Q9Y5G5 932 aa9.21□□□□□ -0.94
CDC42BPA-206ENST00000429440 SPATA31A1Q5TZJ5 1347 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF532Q9HCE3 1301 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF839A8K0R7 811 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 H0YJX3 145 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 POLR1CO15160 346 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 MSI1O43347 362 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 MARCH6O60337 910 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 SNAP91O60641 907 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 CFL1P23528 166 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 CPOXP36551 454 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 COILP38432 576 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 CPA2P48052 419 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 PRKCQQ04759 706 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 RALGDSQ12967 914 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ITPK1Q13572 414 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 TMED2Q15363 201 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 PTPROQ16827 1216 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 PPP6R3Q5H9R7 873 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 FAM122CQ6P4D5 195 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF571Q7Z3V5 609 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 HAUS6Q7Z4H7 955 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ADAMTSL2Q86TH1 951 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 TTC7BQ86TV6 843 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 CAND1Q86VP6 1230 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 C12orf50Q8NA57 414 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms