RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 PSMC4P43686 418 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 RGS7P49802 495 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 GEMIN4P57678 1058 aaKnown RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 TAF5Q15542 800 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 DEFB115Q30KQ5 88 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 EFHC2Q5JST6 749 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 TRNP1Q6NT89 227 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 CYP4V2Q6ZWL3 525 aaPredicted RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 TMEM110Q86TL2 294 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 ACOT1Q86TX2 421 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 UNC45BQ8IWX7 931 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 C12orf29Q8N999 325 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 FAM71DQ8N9W8 422 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 GDAP1Q8TB36 358 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 RNF157Q96PX1 679 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 TGS1Q96RS0 853 aaKnown RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 FRMD8Q9BZ67 464 aaPredicted RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 TRABDQ9H4I3 376 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 TUBGCP4Q9UGJ1 667 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 XPO7Q9UIA9 1087 aaKnown RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 MBLAC1A4D2B0 266 aaPredicted RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 A6NJR5 290 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 GOLGA8MH3BSY2 632 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 APOL1O14791 398 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 MDM4O15151 490 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 ECM2O94769 699 aaPredicted RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 GBP2P32456 591 aaPredicted RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 BASP1P80723 227 aaKnown RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 CDO1Q16878 200 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 C15orf59Q2T9L4 293 aaPredicted RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 CCDC14Q49A88 953 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 C9orf57Q5W0N0 161 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 NUGGCQ68CJ6 796 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 PMF1Q6P1K2 205 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 TTC30AQ86WT1 665 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 OR6B3Q8NGW1 331 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 NPLOC4Q8TAT6 608 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 FAM172AQ8WUF8 416 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 SLC35F5Q8WV83 523 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 GRAMD1AQ96CP6 724 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 ZMAT2Q96NC0 199 aaKnown RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 OSMRQ99650 979 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 EIF2AQ9BY44 585 aaKnown RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 NGRNQ9NPE2 291 aaKnown RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 CYLDQ9NQC7 956 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 FAM49BQ9NUQ9 324 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 FGFR1OP2Q9NVK5 253 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 H7C0C1 242 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 PIK3R2O00459 728 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 RECQL4O94761 1208 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 SCTRP47872 440 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 ATP5OP48047 213 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 BCAT1P54687 386 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 TMEM62Q0P6H9 643 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 BST2Q10589 180 aaKnown RBP14.28□□□□□ -0.12
THBS3-202ENST00000428962 MMRN1Q13201 1228 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 MPP2Q14168 576 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 SPARCL1Q14515 664 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 FBXO47Q5MNV8 452 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 HP1BP3Q5SSJ5 553 aaPredicted RBP14.28□□□□□ -0.12
THBS3-202ENST00000428962 ANKRD22Q5VYY1 191 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 SPRYD7Q5W111 196 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 SCYL2Q6P3W7 929 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 CAPN12Q6ZSI9 719 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 TRPM8Q7Z2W7 1104 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 SPATA21Q7Z572 469 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 ANKMY2Q8IV38 441 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 GBP7Q8N8V2 638 aaPredicted RBP14.28□□□□□ -0.12
THBS3-202ENST00000428962 KAT2BQ92831 832 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 ZNF670Q9BS34 389 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 ACSS3Q9H6R3 686 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 SSU72Q9NP77 194 aaKnown RBP14.28□□□□□ -0.12
THBS3-202ENST00000428962 PAK5Q9P286 719 aa14.28□□□□□ -0.12
THBS3-202ENST00000428962 ZMYND8Q9ULU4 1186 aaPredicted RBP14.28□□□□□ -0.12
THBS3-202ENST00000428962 A8MXQ7 604 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 CHADO15335 359 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 DYNC1LI2O43237 492 aaPredicted RBP14.27□□□□□ -0.12
THBS3-202ENST00000428962 SPAG6O75602 509 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 GRAP2O75791 330 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 DNAJC8O75937 253 aaPredicted RBP14.27□□□□□ -0.12
THBS3-202ENST00000428962 PTPN9P43378 593 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 ACADSBP45954 432 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 VEGFBP49765 207 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 GPX6P59796 221 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 ATP11AP98196 1134 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 MFSD10Q14728 455 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 FNBP1LQ5T0N5 605 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 SH3PXD2AQ5TCZ1 1133 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 ALKAL1Q6UXT8 129 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 C4orf22Q6V702 233 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 ARCQ7LC44 396 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 PALM2Q8IXS6 379 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 C2orf69Q8N8R5 385 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 FBXO36Q8NEA4 188 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 PIWIL1Q96J94 861 aaKnown RBP14.27□□□□□ -0.12
THBS3-202ENST00000428962 NXF3Q9H4D5 531 aaKnown RBP14.27□□□□□ -0.12
THBS3-202ENST00000428962 C10orf88Q9H8K7 445 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 MLXIPLQ9NP71 852 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 RABGEF1Q9UJ41 708 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 ARL2BPQ9Y2Y0 163 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms